RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W YBR144CP34215 104 aa3.36□□□□□ -1.87
SEN1YLR430W AGA1P32323 725 aa3.36□□□□□ -1.87
SEN1YLR430W YMR295CQ03559 197 aa3.36□□□□□ -1.87
SEN1YLR430W YFL019CP43576 117 aa3.35□□□□□ -1.87
SEN1YLR430W SPS100P13130 326 aa3.35□□□□□ -1.87
SEN1YLR430W RPL16AP26784 199 aaKnown RBP3.35□□□□□ -1.87
SEN1YLR430W YML122CQ03207 126 aa3.35□□□□□ -1.87
SEN1YLR430W YBL071CP38185 102 aa3.35□□□□□ -1.87
SEN1YLR430W YGR018CP53211 109 aa3.35□□□□□ -1.87
SEN1YLR430W ICY1Q04329 127 aa3.35□□□□□ -1.87
SEN1YLR430W RPS14AP06367 137 aaKnown RBP3.34□□□□□ -1.87
SEN1YLR430W RPS14BP39516 138 aaKnown RBP3.34□□□□□ -1.87
SEN1YLR430W YLR285C-AQ3E771 56 aa3.34□□□□□ -1.87
SEN1YLR430W YDL022C-AP0C5L6 82 aa3.34□□□□□ -1.87
SEN1YLR430W RSM18P40033 138 aa3.34□□□□□ -1.87
SEN1YLR430W YDL009CQ12210 107 aa3.34□□□□□ -1.87
SEN1YLR430W ARF1P11076 181 aaKnown RBP3.34□□□□□ -1.87
SEN1YLR430W TRS23Q03784 219 aa3.34□□□□□ -1.87
SEN1YLR430W PMD1P32634 1753 aa3.34□□□□□ -1.88
SEN1YLR430W YSF3P0C074 85 aaPredicted RBP3.34□□□□□ -1.88
SEN1YLR430W SPT4P32914 102 aaPredicted RBP3.34□□□□□ -1.88
SEN1YLR430W YKR073CP36153 106 aa3.34□□□□□ -1.88
SEN1YLR430W YMR181CQ03231 154 aa3.34□□□□□ -1.88
SEN1YLR430W YOR008C-AQ3E7B9 74 aa3.34□□□□□ -1.88
SEN1YLR430W YBR209WP38311 105 aa3.33□□□□□ -1.88
SEN1YLR430W ECO1P43605 281 aa3.33□□□□□ -1.88
SEN1YLR430W YAL065CO13511 128 aa3.33□□□□□ -1.88
SEN1YLR430W YAL064W-BO13512 126 aa3.33□□□□□ -1.88
SEN1YLR430W AIM4P38305 123 aaPredicted RBP3.33□□□□□ -1.88
SEN1YLR430W YMR141CP40211 102 aa3.33□□□□□ -1.88
SEN1YLR430W URM1P40554 99 aaPredicted RBP3.33□□□□□ -1.88
SEN1YLR430W PIR5P46999 287 aa3.33□□□□□ -1.88
SEN1YLR430W API2Q04413 109 aa3.33□□□□□ -1.88
SEN1YLR430W YPR053CQ6Q5F3 151 aa3.33□□□□□ -1.88
SEN1YLR430W KEG1P43614 200 aa3.33□□□□□ -1.88
SEN1YLR430W SPO24Q3E752 67 aa3.33□□□□□ -1.88
SEN1YLR430W FKS1P38631 1876 aaKnown RBP3.33□□□□□ -1.88
SEN1YLR430W YHR214C-DP0CX93 97 aa3.32□□□□□ -1.88
SEN1YLR430W FHN1P53279 174 aa3.32□□□□□ -1.88
SEN1YLR430W RPL15BP54780 204 aaPredicted RBP3.32□□□□□ -1.88
SEN1YLR430W ISF1P32488 338 aa3.32□□□□□ -1.88
SEN1YLR430W GAT4P40569 121 aa3.32□□□□□ -1.88
SEN1YLR430W ECM29P38737 1868 aa3.32□□□□□ -1.88
SEN1YLR430W YHR213WP0CI67 198 aa3.32□□□□□ -1.88
SEN1YLR430W MIC10Q96VH5 97 aa3.32□□□□□ -1.88
SEN1YLR430W RIF1P29539 1916 aa3.32□□□□□ -1.88
SEN1YLR430W YKR045CP36138 183 aa3.32□□□□□ -1.88
SEN1YLR430W ICS3P47034 131 aa3.31□□□□□ -1.88
SEN1YLR430W GLO1P50107 326 aa3.31□□□□□ -1.88
SEN1YLR430W AIR2Q12476 344 aaKnown RBP3.31□□□□□ -1.88
SEN1YLR430W YKL065W-AQ2V2P2 73 aa3.31□□□□□ -1.88
SEN1YLR430W YNL208WP40159 199 aaKnown RBP3.31□□□□□ -1.88
SEN1YLR430W MXR2P25566 168 aa3.31□□□□□ -1.88
SEN1YLR430W IMP2P46972 177 aa3.31□□□□□ -1.88
SEN1YLR430W YOR314WQ12506 109 aa3.31□□□□□ -1.88
SEN1YLR430W YLR156WP0CE96 114 aa3.3□□□□□ -1.88
SEN1YLR430W YLR159WP0CE97 114 aa3.3□□□□□ -1.88
SEN1YLR430W YLR161WP0CE98 114 aa3.3□□□□□ -1.88
SEN1YLR430W PGU1P47180 361 aa3.3□□□□□ -1.88
SEN1YLR430W TDA8Q6B2U8 126 aa3.3□□□□□ -1.88
SEN1YLR430W IRC21Q04772 201 aa3.3□□□□□ -1.88
SEN1YLR430W RPL26AP05743 127 aaKnown RBP3.3□□□□□ -1.88
SEN1YLR430W YCR022CP25620 114 aa3.3□□□□□ -1.88
SEN1YLR430W ATP20Q12233 115 aa3.3□□□□□ -1.88
SEN1YLR430W ERI1P62651 68 aaKnown RBP3.3□□□□□ -1.88
SEN1YLR430W SAP30P38429 201 aa3.29□□□□□ -1.88
SEN1YLR430W TSC3Q3E790 80 aa3.29□□□□□ -1.88
SEN1YLR430W YJR107C-AP0CT86 78 aa3.29□□□□□ -1.88
SEN1YLR430W PCP1P53259 346 aa3.29□□□□□ -1.88
SEN1YLR430W PRM7Q12459 698 aa3.29□□□□□ -1.88
SEN1YLR430W NCE102Q12207 173 aaRIP-Chip data3.29□□□□□ -1.88not detected
SEN1YLR430W YDR246W-AQ3E763 66 aa3.29□□□□□ -1.88
SEN1YLR430W TVP23P38962 199 aa3.29□□□□□ -1.88
SEN1YLR430W SMD1Q02260 146 aaPredicted RBP3.29□□□□□ -1.88
SEN1YLR430W RPC11Q04307 110 aaPredicted RBP3.29□□□□□ -1.88
SEN1YLR430W QCR8P08525 94 aa3.29□□□□□ -1.88
SEN1YLR430W RTG1P32607 177 aa3.29□□□□□ -1.88
SEN1YLR430W TDA2P40045 126 aa3.29□□□□□ -1.88
SEN1YLR430W RPL26BP53221 127 aaKnown RBP3.28□□□□□ -1.88
SEN1YLR430W SPG1P50088 95 aa3.28□□□□□ -1.88
SEN1YLR430W YNL190WP53872 204 aa3.28□□□□□ -1.88
SEN1YLR430W HSP150P32478 413 aa3.28□□□□□ -1.88
SEN1YLR430W RRT1P38192 103 aa3.28□□□□□ -1.88
SEN1YLR430W ATP15P21306 62 aa3.28□□□□□ -1.88
SEN1YLR430W CRC1Q12289 327 aa3.28□□□□□ -1.88
SEN1YLR430W YDR274CP87283 123 aa3.28□□□□□ -1.89
SEN1YLR430W YRF1-3P0CX14 1859 aa3.28□□□□□ -1.89
SEN1YLR430W YRF1-7P0CX15 1859 aa3.28□□□□□ -1.89
SEN1YLR430W YRF1-6P53819 1859 aa3.28□□□□□ -1.89
SEN1YLR430W MPC3P53311 146 aa3.27□□□□□ -1.89
SEN1YLR430W MIG3P39943 394 aa3.27□□□□□ -1.89
SEN1YLR430W SPG4Q04438 115 aa3.27□□□□□ -1.89
SEN1YLR430W YDR182W-AQ3E796 67 aa3.27□□□□□ -1.89
SEN1YLR430W YOR381W-AQ3E804 55 aa3.27□□□□□ -1.89
SEN1YLR430W RRT15Q3E811 62 aa3.27□□□□□ -1.89
SEN1YLR430W DIF1O13577 133 aa3.27□□□□□ -1.89
SEN1YLR430W RGM1Q00453 211 aa3.27□□□□□ -1.89
SEN1YLR430W RPL36BO14455 100 aaKnown RBP3.26□□□□□ -1.89
SEN1YLR430W RPL36AP05745 100 aaPredicted RBP3.26□□□□□ -1.89
SEN1YLR430W RPB9P27999 122 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms