RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W RPS25BP0C0T4 108 aaKnown RBP2.76□□□□□ -1.97
SOF1YLL011W PAM16P42949 149 aa2.76□□□□□ -1.97
SOF1YLL011W RPS25AQ3E792 108 aaPredicted RBP2.76□□□□□ -1.97
SOF1YLL011W YCR099CP25657 155 aa2.75□□□□□ -1.97
SOF1YLL011W HPA3P39979 161 aa2.75□□□□□ -1.97
SOF1YLL011W YFR035CP43608 114 aa2.75□□□□□ -1.97
SOF1YLL011W ZEO1Q08245 113 aa2.75□□□□□ -1.97
SOF1YLL011W YHR007C-AQ07074 71 aa2.74□□□□□ -1.97
SOF1YLL011W HRT1Q08273 121 aa2.74□□□□□ -1.97
SOF1YLL011W CMC4Q3E7A9 73 aa2.74□□□□□ -1.97
SOF1YLL011W MRPL44P19956 98 aa2.73□□□□□ -1.97
SOF1YLL011W YKL044WP36092 106 aa2.73□□□□□ -1.97
SOF1YLL011W YBR090CP38253 122 aa2.73□□□□□ -1.97
SOF1YLL011W GNA1P43577 159 aaPredicted RBP2.73□□□□□ -1.97
SOF1YLL011W DAN1P47178 298 aa2.73□□□□□ -1.97
SOF1YLL011W AVO2Q04749 426 aa2.73□□□□□ -1.97
SOF1YLL011W FLO9P39712 1322 aa2.73□□□□□ -1.97
SOF1YLL011W UBC5P15732 148 aa2.72□□□□□ -1.97
SOF1YLL011W HSP150P32478 413 aa2.72□□□□□ -1.97
SOF1YLL011W YEL014CP39999 101 aa2.72□□□□□ -1.97
SOF1YLL011W YGR164WP53291 111 aa2.72□□□□□ -1.97
SOF1YLL011W STT4P37297 1900 aa2.72□□□□□ -1.97
SOF1YLL011W HAP3P13434 144 aa2.71□□□□□ -1.97
SOF1YLL011W RPB7P34087 171 aa2.71□□□□□ -1.97
SOF1YLL011W IPT1P38954 527 aa2.71□□□□□ -1.97
SOF1YLL011W SNF11P38956 169 aa2.71□□□□□ -1.97
SOF1YLL011W MET31Q03081 177 aa2.71□□□□□ -1.97
SOF1YLL011W SEC59P20048 519 aa2.71□□□□□ -1.98
SOF1YLL011W RPS27AP35997 82 aaKnown RBP2.71□□□□□ -1.98
SOF1YLL011W RPS27BP38711 82 aa2.71□□□□□ -1.98
SOF1YLL011W ERV14P53173 138 aa2.71□□□□□ -1.98
SOF1YLL011W BRP1P53194 125 aa2.71□□□□□ -1.98
SOF1YLL011W PAU21P0CE86 164 aa2.7□□□□□ -1.98
SOF1YLL011W PAU22P0CE87 164 aa2.7□□□□□ -1.98
SOF1YLL011W ECM31P38122 312 aa2.7□□□□□ -1.98
SOF1YLL011W YEA6P39953 335 aa2.7□□□□□ -1.98
SOF1YLL011W DCV1P43595 202 aa2.7□□□□□ -1.98
SOF1YLL011W NAT5Q08689 176 aa2.7□□□□□ -1.98
SOF1YLL011W YCL001W-BQ96VH2 84 aa2.7□□□□□ -1.98
SOF1YLL011W MED11Q99278 115 aa2.7□□□□□ -1.98
SOF1YLL011W FAS1P07149 2051 aaKnown RBP2.69□□□□□ -1.98
SOF1YLL011W EMP24P32803 203 aaKnown RBP2.69□□□□□ -1.98
SOF1YLL011W YMR103CQ04436 120 aa2.69□□□□□ -1.98
SOF1YLL011W RPL13AQ12690 199 aaPredicted RBP2.69□□□□□ -1.98
SOF1YLL011W FUN14P18411 198 aa2.68□□□□□ -1.98
SOF1YLL011W GPI19Q04082 140 aa2.68□□□□□ -1.98
SOF1YLL011W GPI11Q06636 219 aa2.68□□□□□ -1.98
SOF1YLL011W YOR032W-AQ8TGS1 66 aa2.68□□□□□ -1.98
SOF1YLL011W SEC16P48415 2195 aaKnown RBP2.68□□□□□ -1.98
SOF1YLL011W TDA2P40045 126 aa2.67□□□□□ -1.98
SOF1YLL011W YAE1P47118 141 aaPredicted RBP2.67□□□□□ -1.98
SOF1YLL011W YHR086W-AQ3E746 53 aa2.67□□□□□ -1.98
SOF1YLL011W HSP10P38910 106 aa2.66□□□□□ -1.98
SOF1YLL011W YGL149WP53116 101 aa2.66□□□□□ -1.98
SOF1YLL011W RGM1Q00453 211 aa2.66□□□□□ -1.98
SOF1YLL011W NHP10Q03435 203 aa2.66□□□□□ -1.98
SOF1YLL011W CYR1P08678 2026 aaKnown RBP2.66□□□□□ -1.98
SOF1YLL011W HYP2P23301 157 aaKnown RBP2.65□□□□□ -1.98
SOF1YLL011W PEP8P40335 379 aa2.65□□□□□ -1.98
SOF1YLL011W YFL051CP43552 160 aa2.65□□□□□ -1.98
SOF1YLL011W YPL067CQ02754 198 aa2.65□□□□□ -1.98
SOF1YLL011W YLR365WQ7LIF2 110 aa2.65□□□□□ -1.98
SOF1YLL011W RPL22BP56628 122 aaKnown RBP2.65□□□□□ -1.99
SOF1YLL011W RTC6O14464 93 aa2.64□□□□□ -1.99
SOF1YLL011W YBR219CP38317 127 aa2.64□□□□□ -1.99
SOF1YLL011W TAR1Q8TGM6 124 aa2.64□□□□□ -1.99
SOF1YLL011W YSF3P0C074 85 aaPredicted RBP2.63□□□□□ -1.99
SOF1YLL011W NRG2P38082 220 aa2.63□□□□□ -1.99
SOF1YLL011W YEL008WP40001 126 aa2.63□□□□□ -1.99
SOF1YLL011W YFR010W-AP0C5N0 62 aa2.62□□□□□ -1.99
SOF1YLL011W YHR130CP38834 111 aa2.62□□□□□ -1.99
SOF1YLL011W YER187WP40102 141 aa2.62□□□□□ -1.99
SOF1YLL011W IGO1P53897 168 aa2.62□□□□□ -1.99
SOF1YLL011W YLR162WQ06235 118 aa2.62□□□□□ -1.99
SOF1YLL011W YMR090WQ04304 227 aaKnown RBP2.61□□□□□ -1.99
SOF1YLL011W MIX14Q04341 121 aa2.61□□□□□ -1.99
SOF1YLL011W YPL261CQ08976 102 aa2.6□□□□□ -1.99
SOF1YLL011W Q0297Q9ZZV8 51 aa2.6□□□□□ -1.99
SOF1YLL011W PAU12P53343 120 aa2.59□□□□□ -1.99
SOF1YLL011W QCR8P08525 94 aa2.58□□□□□ -2
SOF1YLL011W YJL197C-AP0C5P0 93 aa2.58□□□□□ -2
SOF1YLL011W YHR214C-DP0CX93 97 aa2.58□□□□□ -2
SOF1YLL011W UBC4P15731 148 aa2.58□□□□□ -2
SOF1YLL011W MRPL11P36521 249 aaPredicted RBP2.58□□□□□ -2
SOF1YLL011W YLR296WQ05898 108 aa2.58□□□□□ -2
SOF1YLL011W OST5Q92316 86 aa2.58□□□□□ -2
SOF1YLL011W MIC10Q96VH5 97 aa2.58□□□□□ -2
SOF1YLL011W YHL037CP38733 133 aa2.58□□□□□ -2
SOF1YLL011W FIT1Q04433 528 aa2.58□□□□□ -2
SOF1YLL011W YOS1Q3E834 85 aa2.58□□□□□ -2
SOF1YLL011W MHF1Q3E835 90 aa2.58□□□□□ -2
SOF1YLL011W HUR1P45820 110 aa2.57□□□□□ -2
SOF1YLL011W YNL146C-AQ3E7Z1 64 aa2.57□□□□□ -2
SOF1YLL011W GTT1P40582 234 aa2.56□□□□□ -2
SOF1YLL011W DAD1Q12248 94 aa2.56□□□□□ -2
SOF1YLL011W KSH1Q8TGJ3 72 aa2.56□□□□□ -2
SOF1YLL011W RPL36BO14455 100 aaKnown RBP2.55□□□□□ -2
SOF1YLL011W RPL36AP05745 100 aaPredicted RBP2.55□□□□□ -2
SOF1YLL011W YGL014C-AP0C5N1 53 aa2.55□□□□□ -2
SOF1YLL011W YHR213WP0CI67 198 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms