RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W QCR9P22289 66 aa0.91□□□□□ -2.26
SEC28YIL076W HSP12P22943 109 aaKnown RBP0.91□□□□□ -2.26
SEC28YIL076W AME1P38313 324 aa0.91□□□□□ -2.26
SEC28YIL076W YBR242WP38331 238 aa0.91□□□□□ -2.26
SEC28YIL076W TRS20P38334 175 aa0.91□□□□□ -2.26
SEC28YIL076W YHR173CP38864 112 aa0.91□□□□□ -2.26
SEC28YIL076W YMR141CP40211 102 aa0.91□□□□□ -2.26
SEC28YIL076W YFL065CP43539 102 aa0.91□□□□□ -2.26
SEC28YIL076W YJR111CP47148 283 aaKnown RBP0.91□□□□□ -2.26
SEC28YIL076W AIM34Q03673 198 aa0.91□□□□□ -2.26
SEC28YIL076W CUE4Q04201 117 aaPredicted RBP0.91□□□□□ -2.26
SEC28YIL076W YLR146W-AQ2V2P1 62 aa0.91□□□□□ -2.26
SEC28YIL076W SPO13P23624 291 aa0.9□□□□□ -2.27
SEC28YIL076W YBR013CP38215 129 aa0.9□□□□□ -2.27
SEC28YIL076W MGA1P53050 456 aa0.9□□□□□ -2.27
SEC28YIL076W DAD4P69851 72 aa0.9□□□□□ -2.27
SEC28YIL076W RAV2Q03956 351 aa0.9□□□□□ -2.27
SEC28YIL076W YMR320WQ04897 101 aa0.9□□□□□ -2.27
SEC28YIL076W YLR342W-AQ3E810 57 aa0.9□□□□□ -2.27
SEC28YIL076W YLR307C-AQ3E825 87 aa0.9□□□□□ -2.27
SEC28YIL076W YMR122W-AQ3E842 84 aa0.9□□□□□ -2.27
SEC28YIL076W ACP1P32463 125 aa0.89□□□□□ -2.27
SEC28YIL076W POG1P40473 351 aa0.89□□□□□ -2.27
SEC28YIL076W ERI1P62651 68 aaKnown RBP0.89□□□□□ -2.27
SEC28YIL076W LCL1Q02786 101 aa0.89□□□□□ -2.27
SEC28YIL076W YLR194CQ05777 254 aa0.89□□□□□ -2.27
SEC28YIL076W DGA1Q08650 418 aa0.89□□□□□ -2.27
SEC28YIL076W YDR010CQ12426 110 aa0.89□□□□□ -2.27
SEC28YIL076W YAR023CD6VPM8 179 aa0.88□□□□□ -2.27
SEC28YIL076W TIR1P10863 254 aa0.88□□□□□ -2.27
SEC28YIL076W SEC59P20048 519 aa0.88□□□□□ -2.27
SEC28YIL076W SRP21P32342 167 aa0.88□□□□□ -2.27
SEC28YIL076W MRP49P32388 137 aa0.88□□□□□ -2.27
SEC28YIL076W APS1P35181 156 aa0.88□□□□□ -2.27
SEC28YIL076W RPL14AP36105 138 aaKnown RBP0.88□□□□□ -2.27
SEC28YIL076W YBR090CP38253 122 aa0.88□□□□□ -2.27
SEC28YIL076W YBR292CP38357 123 aa0.88□□□□□ -2.27
SEC28YIL076W RPL14BP38754 138 aaKnown RBP0.88□□□□□ -2.27
SEC28YIL076W SPC25P40014 221 aa0.88□□□□□ -2.27
SEC28YIL076W ERG28P40030 148 aa0.88□□□□□ -2.27
SEC28YIL076W RPC10P40422 70 aa0.88□□□□□ -2.27
SEC28YIL076W EMC5P40540 141 aa0.88□□□□□ -2.27
SEC28YIL076W ATP19P81451 68 aa0.88□□□□□ -2.27
SEC28YIL076W YCL001W-AP87012 153 aa0.88□□□□□ -2.27
SEC28YIL076W CWC27Q02770 301 aa0.88□□□□□ -2.27
SEC28YIL076W UPS3Q04006 179 aa0.88□□□□□ -2.27
SEC28YIL076W YHR007C-AQ07074 71 aa0.88□□□□□ -2.27
SEC28YIL076W DAD1Q12248 94 aa0.88□□□□□ -2.27
SEC28YIL076W YPR010C-AA5Z2X5 72 aa0.87□□□□□ -2.27
SEC28YIL076W DDR48P18899 430 aaKnown RBP0.87□□□□□ -2.27
SEC28YIL076W YHL042WP38729 150 aa0.87□□□□□ -2.27
SEC28YIL076W GCV3P39726 170 aaPredicted RBP0.87□□□□□ -2.27
SEC28YIL076W CYB5P40312 120 aa0.87□□□□□ -2.27
SEC28YIL076W YIL163CP40448 117 aa0.87□□□□□ -2.27
SEC28YIL076W MOG1P47123 218 aa0.87□□□□□ -2.27
SEC28YIL076W YGR017WP53210 297 aa0.87□□□□□ -2.27
SEC28YIL076W PAU4P53427 120 aa0.87□□□□□ -2.27
SEC28YIL076W PMP3P87284 55 aa0.87□□□□□ -2.27
SEC28YIL076W MRPS17Q03246 237 aaPredicted RBP0.87□□□□□ -2.27
SEC28YIL076W YOR015WQ12169 119 aa0.87□□□□□ -2.27
SEC28YIL076W YGL194C-AQ2V2P6 80 aa0.87□□□□□ -2.27
SEC28YIL076W COX19Q3E731 98 aa0.87□□□□□ -2.27
SEC28YIL076W RPS22AP0C0W1 130 aaKnown RBP0.86□□□□□ -2.27
SEC28YIL076W PAU1P0CE88 120 aa0.86□□□□□ -2.27
SEC28YIL076W PAU14P0CE89 120 aa0.86□□□□□ -2.27
SEC28YIL076W PAU6P0CE90 120 aa0.86□□□□□ -2.27
SEC28YIL076W PAU18P0CE91 120 aa0.86□□□□□ -2.27
SEC28YIL076W PAU8P0CE92 120 aa0.86□□□□□ -2.27
SEC28YIL076W PAU11P0CE93 120 aa0.86□□□□□ -2.27
SEC28YIL076W UBI4P0CG63 381 aaKnown RBP0.86□□□□□ -2.27
SEC28YIL076W MRPL31P14063 131 aaPredicted RBP0.86□□□□□ -2.27
SEC28YIL076W PAU13P38725 120 aa0.86□□□□□ -2.27
SEC28YIL076W YHR140WP38842 239 aa0.86□□□□□ -2.27
SEC28YIL076W SRP14P38985 146 aa0.86□□□□□ -2.27
SEC28YIL076W MMS2P53152 137 aa0.86□□□□□ -2.27
SEC28YIL076W PAU10Q03050 120 aa0.86□□□□□ -2.27
SEC28YIL076W PAU20Q08322 120 aa0.86□□□□□ -2.27
SEC28YIL076W YDR029WQ12111 104 aa0.86□□□□□ -2.27
SEC28YIL076W PAU9Q3E770 120 aa0.86□□□□□ -2.27
SEC28YIL076W YAL065CO13511 128 aa0.85□□□□□ -2.27
SEC28YIL076W RPL27AP0C2H6 136 aaKnown RBP0.85□□□□□ -2.27
SEC28YIL076W YAL064WP39711 94 aa0.85□□□□□ -2.27
SEC28YIL076W AIM19P40502 157 aa0.85□□□□□ -2.27
SEC28YIL076W GPI19Q04082 140 aa0.85□□□□□ -2.27
SEC28YIL076W YOR105WQ08504 108 aa0.85□□□□□ -2.27
SEC28YIL076W FCF2Q12035 217 aaPredicted RBP0.85□□□□□ -2.27
SEC28YIL076W YLR118CQ12354 227 aa0.85□□□□□ -2.27
SEC28YIL076W PCC1Q3E833 88 aa0.85□□□□□ -2.27
SEC28YIL076W MAG1P22134 296 aaKnown RBP0.84□□□□□ -2.27
SEC28YIL076W BET1P22804 142 aa0.84□□□□□ -2.27
SEC28YIL076W YKR070WP36151 352 aaKnown RBP0.84□□□□□ -2.27
SEC28YIL076W SEC72P39742 193 aaKnown RBP0.84□□□□□ -2.27
SEC28YIL076W PHS1P40857 217 aa0.84□□□□□ -2.27
SEC28YIL076W CIN5P40917 295 aa0.84□□□□□ -2.27
SEC28YIL076W DCV1P43595 202 aa0.84□□□□□ -2.27
SEC28YIL076W SNA2P56508 79 aa0.84□□□□□ -2.27
SEC28YIL076W GIM5Q04493 163 aa0.84□□□□□ -2.27
SEC28YIL076W TVP18Q04767 167 aa0.84□□□□□ -2.27
SEC28YIL076W YMR175W-AQ3E766 64 aa0.84□□□□□ -2.27
SEC28YIL076W YCL001W-BQ96VH2 84 aa0.84□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms