RNA–Protein interactions for RNA: YHL009W-B

YHL009W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHL009W-B, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-BYHL009W-B SHU1P38751 150 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B MIC19P43594 170 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B PGA2P53903 129 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B RPS25AQ3E792 108 aaPredicted RBP-1.01□□□□□ -2.57
YHL009W-BYHL009W-B POL2P21951 2222 aaKnown RBP-1.01□□□□□ -2.57
YHL009W-BYHL009W-B PDX3P38075 228 aaKnown RBP-1.01□□□□□ -2.57
YHL009W-BYHL009W-B HOC1P47124 396 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B APS2Q00381 147 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B RTR2Q12378 196 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B GRX2P17695 143 aaKnown RBP-1.01□□□□□ -2.57
YHL009W-BYHL009W-B MRPL44P19956 98 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B LSM2P38203 95 aaKnown RBP-1.01□□□□□ -2.57
YHL009W-BYHL009W-B HPA3P39979 161 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B IMP2P46972 177 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B HAM1P47119 197 aaKnown RBP-1.01□□□□□ -2.57
YHL009W-BYHL009W-B YGR042WP53227 271 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B YDR042CQ03205 200 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B ATG38Q05789 226 aaKnown RBP-1.01□□□□□ -2.57
YHL009W-BYHL009W-B YLR012CQ07927 99 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B KTI11Q3E840 82 aa-1.01□□□□□ -2.57
YHL009W-BYHL009W-B VPS20Q04272 221 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B Q0144Q9ZZW2 109 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B RPL36BO14455 100 aaKnown RBP-1.02□□□□□ -2.57
YHL009W-BYHL009W-B RPL36AP05745 100 aaPredicted RBP-1.02□□□□□ -2.57
YHL009W-BYHL009W-B RSM18P40033 138 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B JAC1P53193 184 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B BSC4P53841 131 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B MRPL24P36525 258 aaPredicted RBP-1.02□□□□□ -2.57
YHL009W-BYHL009W-B EGD2P38879 174 aaKnown RBP-1.02□□□□□ -2.57
YHL009W-BYHL009W-B RPL22BP56628 122 aaKnown RBP-1.02□□□□□ -2.57
YHL009W-BYHL009W-B TOA2P32774 122 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B DYN3Q04949 312 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B ADK1P07170 222 aaKnown RBP-1.02□□□□□ -2.57
YHL009W-BYHL009W-B UBI4P0CG63 381 aaKnown RBP-1.02□□□□□ -2.57
YHL009W-BYHL009W-B VPH2P32341 215 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B SEC66P33754 206 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B SRX1P36077 127 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B PRS3P38689 320 aaKnown RBP-1.02□□□□□ -2.57
YHL009W-BYHL009W-B CWC27Q02770 301 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B YMR320WQ04897 101 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B YOL118CQ08259 102 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B NBL1Q3E7Y6 73 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B YCL012CQ8J0M4 134 aa-1.02□□□□□ -2.57
YHL009W-BYHL009W-B AHC2P25649 128 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B YFL065CP43539 102 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B COF1Q03048 143 aaKnown RBP-1.03□□□□□ -2.57
YHL009W-BYHL009W-B PBI2P0CT04 75 aaKnown RBP-1.03□□□□□ -2.57
YHL009W-BYHL009W-B NVJ1P38881 321 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B GTT1P40582 234 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B MRPS17Q03246 237 aaPredicted RBP-1.03□□□□□ -2.57
YHL009W-BYHL009W-B YET3Q07451 203 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B YLR050CQ12155 161 aaKnown RBP-1.03□□□□□ -2.57
YHL009W-BYHL009W-B RRP36Q12481 300 aaPredicted RBP-1.03□□□□□ -2.57
YHL009W-BYHL009W-B YDR119W-AQ2V2P9 66 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B YDR182W-AQ3E796 67 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B YNL042W-BQ3E7Z2 85 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B MEI4P29467 408 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B AIM19P40502 157 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B YAE1P47118 141 aaPredicted RBP-1.03□□□□□ -2.57
YHL009W-BYHL009W-B RPC19P28000 142 aaKnown RBP-1.03□□□□□ -2.57
YHL009W-BYHL009W-B SNU13P39990 126 aaKnown RBP-1.03□□□□□ -2.57
YHL009W-BYHL009W-B SEN15Q04675 128 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B CNL1Q06333 122 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B SME1Q12330 94 aaPredicted RBP-1.03□□□□□ -2.57
YHL009W-BYHL009W-B YBR200W-AQ3E755 54 aa-1.03□□□□□ -2.57
YHL009W-BYHL009W-B COX7P10174 60 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B RPS1AP33442 255 aaKnown RBP-1.04□□□□□ -2.58
YHL009W-BYHL009W-B AIM11P87275 137 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B YDR029WQ12111 104 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B SPS2P08459 502 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B YEL073CP39974 107 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B YAR1P46683 200 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B YBL010CP32788 280 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B MPM1P40364 252 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B YRB1P41920 201 aaKnown RBP-1.04□□□□□ -2.58
YHL009W-BYHL009W-B LOC1P43586 204 aaPredicted RBP-1.04□□□□□ -2.58
YHL009W-BYHL009W-B FAR7P43592 221 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B ICY1Q04329 127 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B SCP1Q08873 200 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B YPR203WQ08994 102 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B QCR7P00128 127 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B COX2P00410 251 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B SHE2P36068 246 aaKnown RBP RIP-Chip data-1.04□□□□□ -2.58not detected
YHL009W-BYHL009W-B INA22P40576 216 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B HSK3P69852 69 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B TLG1Q03322 224 aa-1.04□□□□□ -2.58
YHL009W-BYHL009W-B YPT31P38555 223 aaKnown RBP-1.05□□□□□ -2.58
YHL009W-BYHL009W-B BRR2P32639 2163 aaKnown RBP-1.05□□□□□ -2.58
YHL009W-BYHL009W-B YOR015WQ12169 119 aa-1.05□□□□□ -2.58
YHL009W-BYHL009W-B YNL198CP40166 100 aa-1.05□□□□□ -2.58
YHL009W-BYHL009W-B TOS6P48560 102 aa-1.05□□□□□ -2.58
YHL009W-BYHL009W-B NQM1P53228 333 aaPredicted RBP-1.05□□□□□ -2.58
YHL009W-BYHL009W-B FCF2Q12035 217 aaPredicted RBP-1.05□□□□□ -2.58
YHL009W-BYHL009W-B YOR314WQ12506 109 aa-1.05□□□□□ -2.58
YHL009W-BYHL009W-B ERD2P18414 219 aa-1.05□□□□□ -2.58
YHL009W-BYHL009W-B GLC8P41818 229 aa-1.05□□□□□ -2.58
YHL009W-BYHL009W-B MIC27P50945 234 aa-1.05□□□□□ -2.58
YHL009W-BYHL009W-B YIL156W-BQ2V2P4 73 aa-1.05□□□□□ -2.58
YHL009W-BYHL009W-B MIC10Q96VH5 97 aa-1.05□□□□□ -2.58
YHL009W-BYHL009W-B RPL22AP05749 121 aaKnown RBP-1.06□□□□□ -2.58
Retrieved 100 of 5,963 RNA–protein pairs in 132.1 ms