RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C FMP49A0A023PZB3 126 aa2.39□□□□□ -2.03
PXR1YGR280C PAU19P0CE85 124 aa2.39□□□□□ -2.03
PXR1YGR280C PAU21P0CE86 164 aa2.39□□□□□ -2.03
PXR1YGR280C PAU22P0CE87 164 aa2.39□□□□□ -2.03
PXR1YGR280C PAU3P25610 124 aa2.39□□□□□ -2.03
PXR1YGR280C RPS0AP32905 252 aaKnown RBP2.39□□□□□ -2.03
PXR1YGR280C CYB5P40312 120 aa2.39□□□□□ -2.03
PXR1YGR280C CWP2P43497 92 aa2.39□□□□□ -2.03
PXR1YGR280C PAU5P43575 122 aa2.39□□□□□ -2.03
PXR1YGR280C ATC1Q04005 294 aa2.39□□□□□ -2.03
PXR1YGR280C SSS1P35179 80 aa2.38□□□□□ -2.03
PXR1YGR280C RPF1P38805 295 aaKnown RBP2.38□□□□□ -2.03
PXR1YGR280C NAT3Q06504 195 aa2.38□□□□□ -2.03
PXR1YGR280C PPT2Q12036 173 aa2.38□□□□□ -2.03
PXR1YGR280C YGL010WP25338 174 aa2.37□□□□□ -2.03
PXR1YGR280C SRP21P32342 167 aa2.37□□□□□ -2.03
PXR1YGR280C MRP49P32388 137 aa2.37□□□□□ -2.03
PXR1YGR280C DAD2P36162 133 aa2.37□□□□□ -2.03
PXR1YGR280C SRP14P38985 146 aa2.37□□□□□ -2.03
PXR1YGR280C SEC72P39742 193 aaKnown RBP2.37□□□□□ -2.03
PXR1YGR280C VTC1P40046 129 aaRIP-Chip data2.37□□□□□ -2.03not detected
PXR1YGR280C LSM8P47093 109 aaKnown RBP2.37□□□□□ -2.03
PXR1YGR280C CGR1P53188 120 aa2.37□□□□□ -2.03
PXR1YGR280C APS2Q00381 147 aa2.37□□□□□ -2.03
PXR1YGR280C CYT2Q00873 224 aa2.37□□□□□ -2.03
PXR1YGR280C CUE4Q04201 117 aaPredicted RBP2.37□□□□□ -2.03
PXR1YGR280C SMT3Q12306 101 aaKnown RBP2.37□□□□□ -2.03
PXR1YGR280C TIM22Q12328 207 aa2.37□□□□□ -2.03
PXR1YGR280C DCN1Q12395 269 aa2.37□□□□□ -2.03
PXR1YGR280C ENV10Q99382 181 aa2.37□□□□□ -2.03
PXR1YGR280C POR1P04840 283 aaKnown RBP2.36□□□□□ -2.03
PXR1YGR280C QRI5P32344 111 aa2.36□□□□□ -2.03
PXR1YGR280C YBR090CP38253 122 aa2.36□□□□□ -2.03
PXR1YGR280C AME1P38313 324 aa2.36□□□□□ -2.03
PXR1YGR280C YHR173CP38864 112 aa2.36□□□□□ -2.03
PXR1YGR280C YFL019CP43576 117 aa2.36□□□□□ -2.03
PXR1YGR280C SEN15Q04675 128 aa2.36□□□□□ -2.03
PXR1YGR280C LSO2Q3E772 92 aaKnown RBP2.36□□□□□ -2.03
PXR1YGR280C YBR209WP38311 105 aa2.35□□□□□ -2.03
PXR1YGR280C YER085CP40058 173 aa2.35□□□□□ -2.03
PXR1YGR280C YGR149WP48236 432 aa2.35□□□□□ -2.03
PXR1YGR280C YOR105WQ08504 108 aa2.35□□□□□ -2.03
PXR1YGR280C YNR034W-AQ3E841 98 aa2.35□□□□□ -2.03
PXR1YGR280C YCL001W-BQ96VH2 84 aa2.35□□□□□ -2.03
PXR1YGR280C Q0032Q9ZZX7 96 aa2.35□□□□□ -2.03
PXR1YGR280C HMRA1P0CY11 126 aa2.34□□□□□ -2.03
PXR1YGR280C FZF1P32805 299 aa2.34□□□□□ -2.03
PXR1YGR280C PAM17P36147 197 aa2.34□□□□□ -2.03
PXR1YGR280C RPB11P38902 120 aa2.34□□□□□ -2.03
PXR1YGR280C YJR146WP47174 117 aa2.34□□□□□ -2.03
PXR1YGR280C YGL088WP53151 121 aa2.34□□□□□ -2.03
PXR1YGR280C ERV14P53173 138 aa2.34□□□□□ -2.03
PXR1YGR280C ATP19P81451 68 aa2.34□□□□□ -2.03
PXR1YGR280C YAL063C-AQ3E791 96 aa2.34□□□□□ -2.03
PXR1YGR280C YCR024C-BQ3E7Z8 88 aa2.34□□□□□ -2.03
PXR1YGR280C COA6Q3E846 104 aa2.34□□□□□ -2.03
PXR1YGR280C YIL134C-AQ45U18 67 aa2.34□□□□□ -2.03
PXR1YGR280C MRPL31P14063 131 aaPredicted RBP2.33□□□□□ -2.04
PXR1YGR280C YFR045WP43617 309 aa2.33□□□□□ -2.04
PXR1YGR280C RPL12AP0CX53 165 aaKnown RBP2.32□□□□□ -2.04
PXR1YGR280C RPL12BP0CX54 165 aa2.32□□□□□ -2.04
PXR1YGR280C FUN14P18411 198 aa2.32□□□□□ -2.04
PXR1YGR280C SCM4P32564 187 aa2.32□□□□□ -2.04
PXR1YGR280C MRPL11P36521 249 aaPredicted RBP2.32□□□□□ -2.04
PXR1YGR280C KNH1P50112 268 aa2.32□□□□□ -2.04
PXR1YGR280C GIM5Q04493 163 aa2.32□□□□□ -2.04
PXR1YGR280C YMR175W-AQ3E766 64 aa2.32□□□□□ -2.04
PXR1YGR280C RPS22BQ3E7Y3 130 aaKnown RBP2.32□□□□□ -2.04
PXR1YGR280C YCL021W-AQ96VH3 125 aa2.32□□□□□ -2.04
PXR1YGR280C MRPL44P19956 98 aa2.31□□□□□ -2.04
PXR1YGR280C ZRT1P32804 376 aa2.31□□□□□ -2.04
PXR1YGR280C YER134CP40081 178 aa2.31□□□□□ -2.04
PXR1YGR280C FSF1Q12029 327 aaKnown RBP2.31□□□□□ -2.04
PXR1YGR280C SEC4P07560 215 aaKnown RBP2.3□□□□□ -2.04
PXR1YGR280C RPL23AP0CX41 137 aaKnown RBP2.3□□□□□ -2.04
PXR1YGR280C RPL23BP0CX42 137 aaKnown RBP2.3□□□□□ -2.04
PXR1YGR280C CPR1P14832 162 aaKnown RBP2.3□□□□□ -2.04
PXR1YGR280C GSP1P32835 219 aaKnown RBP2.3□□□□□ -2.04
PXR1YGR280C GSP2P32836 220 aaKnown RBP2.3□□□□□ -2.04
PXR1YGR280C MRPL24P36525 258 aaPredicted RBP2.3□□□□□ -2.04
PXR1YGR280C EDC2P40023 145 aaPredicted RBP2.3□□□□□ -2.04
PXR1YGR280C TVP18Q04767 167 aa2.3□□□□□ -2.04
PXR1YGR280C CSM4Q08955 156 aa2.3□□□□□ -2.04
PXR1YGR280C POM33Q12164 279 aa2.3□□□□□ -2.04
PXR1YGR280C FYV7Q12247 151 aa2.3□□□□□ -2.04
PXR1YGR280C ADH1P00330 348 aaKnown RBP2.29□□□□□ -2.04
PXR1YGR280C PAU16P35994 123 aa2.29□□□□□ -2.04
PXR1YGR280C PAU7P39545 55 aa2.29□□□□□ -2.04
PXR1YGR280C RPS29BP41058 56 aaKnown RBP2.29□□□□□ -2.04
PXR1YGR280C YJR085CP47131 105 aaKnown RBP2.29□□□□□ -2.04
PXR1YGR280C YGL118CP53132 145 aa2.29□□□□□ -2.04
PXR1YGR280C THG1P53215 237 aaKnown RBP2.29□□□□□ -2.04
PXR1YGR280C ARC18Q05933 178 aaKnown RBP2.29□□□□□ -2.04
PXR1YGR280C TPT1Q12272 230 aaKnown RBP2.29□□□□□ -2.04
PXR1YGR280C WIP1Q2V2P8 89 aa2.29□□□□□ -2.04
PXR1YGR280C YER078W-AQ3E7A2 54 aa2.29□□□□□ -2.04
PXR1YGR280C RPL27AP0C2H6 136 aaKnown RBP2.28□□□□□ -2.04
PXR1YGR280C AIM29P36154 155 aa2.28□□□□□ -2.04
PXR1YGR280C YGL193CP53097 103 aa2.28□□□□□ -2.04
PXR1YGR280C NAT5Q08689 176 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms