RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W TY1B-BLQ12490 1755 aa3.83□□□□□ -1.8
PDE1YGL248W MRPS16Q02608 121 aa3.82□□□□□ -1.8
PDE1YGL248W ICY1Q04329 127 aa3.82□□□□□ -1.8
PDE1YGL248W PAU23Q07987 124 aa3.82□□□□□ -1.8
PDE1YGL248W PAU17Q12370 124 aa3.82□□□□□ -1.8
PDE1YGL248W PDR12Q02785 1511 aa3.81□□□□□ -1.8
PDE1YGL248W RPL36BO14455 100 aaKnown RBP3.81□□□□□ -1.8
PDE1YGL248W RPL36AP05745 100 aaPredicted RBP3.81□□□□□ -1.8
PDE1YGL248W ATG8P38182 117 aaRIP-Chip data3.81□□□□□ -1.8not detected
PDE1YGL248W CIS3P47001 227 aa3.81□□□□□ -1.8
PDE1YGL248W YDR119W-AQ2V2P9 66 aa3.81□□□□□ -1.8
PDE1YGL248W PCC1Q3E833 88 aa3.81□□□□□ -1.8
PDE1YGL248W RPO21P04050 1733 aaKnown RBP3.81□□□□□ -1.8
PDE1YGL248W NTE1Q04958 1679 aa3.81□□□□□ -1.8
PDE1YGL248W HAP1P0CE41 1502 aa3.8□□□□□ -1.8
PDE1YGL248W PAU16P35994 123 aa3.8□□□□□ -1.8
PDE1YGL248W PAU24P38155 120 aa3.8□□□□□ -1.8
PDE1YGL248W PAU15P40585 124 aa3.8□□□□□ -1.8
PDE1YGL248W YFL051CP43552 160 aa3.8□□□□□ -1.8
PDE1YGL248W YFL012WP43580 148 aa3.8□□□□□ -1.8
PDE1YGL248W RPA190P10964 1664 aaKnown RBP3.8□□□□□ -1.8
PDE1YGL248W RPL22AP05749 121 aaKnown RBP3.79□□□□□ -1.8
PDE1YGL248W RPS19AP07280 144 aaKnown RBP3.79□□□□□ -1.8
PDE1YGL248W RPS19BP07281 144 aaPredicted RBP3.79□□□□□ -1.8
PDE1YGL248W UTR5P32630 166 aa3.79□□□□□ -1.8
PDE1YGL248W UTH1P36135 365 aa3.79□□□□□ -1.8
PDE1YGL248W YPI1P43587 155 aa3.79□□□□□ -1.8
PDE1YGL248W RGM1Q00453 211 aa3.79□□□□□ -1.8
PDE1YGL248W YOR093CQ12275 1648 aa3.78□□□□□ -1.8
PDE1YGL248W RTC6O14464 93 aa3.78□□□□□ -1.8
PDE1YGL248W YJL197C-AP0C5P0 93 aa3.78□□□□□ -1.8
PDE1YGL248W YIR020CP40575 100 aa3.78□□□□□ -1.8
PDE1YGL248W BOL2P53082 120 aa3.78□□□□□ -1.8
PDE1YGL248W DAD4P69851 72 aa3.78□□□□□ -1.8
PDE1YGL248W YIL014C-AQ02598 104 aa3.78□□□□□ -1.8
PDE1YGL248W YPR195CQ06594 109 aa3.78□□□□□ -1.8
PDE1YGL248W YMR030W-AQ3E760 96 aa3.78□□□□□ -1.8
PDE1YGL248W MHF2Q3E829 80 aa3.78□□□□□ -1.8
PDE1YGL248W YLR422WQ06409 1932 aa3.78□□□□□ -1.81
PDE1YGL248W ICS3P47034 131 aa3.77□□□□□ -1.81
PDE1YGL248W MIC27P50945 234 aa3.77□□□□□ -1.81
PDE1YGL248W YOL118CQ08259 102 aa3.77□□□□□ -1.81
PDE1YGL248W SEC11P15367 167 aa3.76□□□□□ -1.81
PDE1YGL248W VMA9Q3E7B6 73 aa3.76□□□□□ -1.81
PDE1YGL248W COX8P04039 78 aa3.75□□□□□ -1.81
PDE1YGL248W RPB7P34087 171 aa3.75□□□□□ -1.81
PDE1YGL248W SRX1P36077 127 aa3.75□□□□□ -1.81
PDE1YGL248W IMP2P46972 177 aa3.75□□□□□ -1.81
PDE1YGL248W YLR194CQ05777 254 aa3.75□□□□□ -1.81
PDE1YGL248W HPA2Q06592 156 aa3.75□□□□□ -1.81
PDE1YGL248W YNR034W-AQ3E841 98 aa3.75□□□□□ -1.81
PDE1YGL248W YIL134C-AQ45U18 67 aa3.75□□□□□ -1.81
PDE1YGL248W BUD3P25558 1636 aa3.74□□□□□ -1.81
PDE1YGL248W MRPS9P38120 278 aa3.74□□□□□ -1.81
PDE1YGL248W YBR292CP38357 123 aa3.74□□□□□ -1.81
PDE1YGL248W FKS1P38631 1876 aaKnown RBP3.74□□□□□ -1.81
PDE1YGL248W LAA1P39526 2014 aa3.74□□□□□ -1.81
PDE1YGL248W YEL014CP39999 101 aa3.74□□□□□ -1.81
PDE1YGL248W YJL027CP47063 138 aaPredicted RBP3.74□□□□□ -1.81
PDE1YGL248W VPS68Q12016 184 aa3.74□□□□□ -1.81
PDE1YGL248W YDR381C-AQ3E6R5 114 aa3.74□□□□□ -1.81
PDE1YGL248W CHC1P22137 1653 aaKnown RBP3.74□□□□□ -1.81
PDE1YGL248W RPL26AP05743 127 aaKnown RBP3.73□□□□□ -1.81
PDE1YGL248W YHR022CP38763 256 aa3.73□□□□□ -1.81
PDE1YGL248W COX23P38824 151 aa3.73□□□□□ -1.81
PDE1YGL248W PAU5P43575 122 aa3.73□□□□□ -1.81
PDE1YGL248W YFL041W-AQ3E817 63 aa3.73□□□□□ -1.81
PDE1YGL248W MRP17P28778 131 aa3.72□□□□□ -1.81
PDE1YGL248W CYT2Q00873 224 aa3.72□□□□□ -1.81
PDE1YGL248W YPL038W-AQ3E7B4 63 aa3.72□□□□□ -1.81
PDE1YGL248W SPO14P36126 1683 aa3.71□□□□□ -1.81
PDE1YGL248W ROX3P25046 220 aa3.71□□□□□ -1.82
PDE1YGL248W HSP150P32478 413 aa3.71□□□□□ -1.82
PDE1YGL248W CMC4Q3E7A9 73 aa3.71□□□□□ -1.82
PDE1YGL248W MYO1P08964 1928 aa3.71□□□□□ -1.82
PDE1YGL248W DNF2Q12675 1612 aa3.7□□□□□ -1.82
PDE1YGL248W QCR8P08525 94 aa3.7□□□□□ -1.82
PDE1YGL248W YNL198CP40166 100 aa3.7□□□□□ -1.82
PDE1YGL248W RPL26BP53221 127 aaKnown RBP3.7□□□□□ -1.82
PDE1YGL248W FIT2Q08906 153 aa3.7□□□□□ -1.82
PDE1YGL248W YOR343CQ12484 108 aa3.7□□□□□ -1.82
PDE1YGL248W VMR1P38735 1592 aa3.69□□□□□ -1.82
PDE1YGL248W KRE9P39005 276 aa3.69□□□□□ -1.82
PDE1YGL248W YPR145C-AQ2V2P0 78 aa3.69□□□□□ -1.82
PDE1YGL248W GSC2P40989 1895 aa3.69□□□□□ -1.82
PDE1YGL248W RPS22AP0C0W1 130 aaKnown RBP3.68□□□□□ -1.82
PDE1YGL248W NHP2P32495 156 aaPredicted RBP3.68□□□□□ -1.82
PDE1YGL248W YBR027CP38220 110 aa3.68□□□□□ -1.82
PDE1YGL248W POR2P40478 281 aa3.68□□□□□ -1.82
PDE1YGL248W COX12Q01519 83 aa3.68□□□□□ -1.82
PDE1YGL248W YDR114CQ04597 100 aa3.68□□□□□ -1.82
PDE1YGL248W YOR105WQ08504 108 aa3.68□□□□□ -1.82
PDE1YGL248W MLP1Q02455 1875 aaKnown RBP3.68□□□□□ -1.82
PDE1YGL248W DOP1Q03921 1698 aa3.68□□□□□ -1.82
PDE1YGL248W IML1P47170 1584 aa3.68□□□□□ -1.82
PDE1YGL248W SNF2P22082 1703 aa3.67□□□□□ -1.82
PDE1YGL248W FAS1P07149 2051 aaKnown RBP3.66□□□□□ -1.82
PDE1YGL248W NUP188P52593 1655 aaKnown RBP3.66□□□□□ -1.82
PDE1YGL248W YHR214C-DP0CX93 97 aa3.66□□□□□ -1.82
PDE1YGL248W HMRA2P0CY13 119 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms