RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C YBR032WP38223 100 aa2.39□□□□□ -2.03
XRN1YGL173C RPB7P34087 171 aa2.39□□□□□ -2.03
XRN1YGL173C YKR070WP36151 352 aaKnown RBP2.39□□□□□ -2.03
XRN1YGL173C SNN1P48232 102 aa2.39□□□□□ -2.03
XRN1YGL173C MIX14Q04341 121 aa2.39□□□□□ -2.03
XRN1YGL173C CYB5P40312 120 aa2.39□□□□□ -2.03
XRN1YGL173C KNH1P50112 268 aa2.39□□□□□ -2.03
XRN1YGL173C YPR013CQ12145 317 aa2.39□□□□□ -2.03
XRN1YGL173C YKL068W-AQ3E826 78 aa2.39□□□□□ -2.03
XRN1YGL173C YDR029WQ12111 104 aa2.38□□□□□ -2.03
XRN1YGL173C YHR214C-DP0CX93 97 aa2.38□□□□□ -2.03
XRN1YGL173C SFT2P38166 215 aa2.38□□□□□ -2.03
XRN1YGL173C YHL018WP38744 120 aaPredicted RBP2.38□□□□□ -2.03
XRN1YGL173C EMC5P40540 141 aa2.38□□□□□ -2.03
XRN1YGL173C YMR103CQ04436 120 aa2.38□□□□□ -2.03
XRN1YGL173C LSM2P38203 95 aaKnown RBP2.38□□□□□ -2.03
XRN1YGL173C YBR242WP38331 238 aa2.38□□□□□ -2.03
XRN1YGL173C YEA6P39953 335 aa2.38□□□□□ -2.03
XRN1YGL173C GSP2P32836 220 aaKnown RBP2.37□□□□□ -2.03
XRN1YGL173C YER039C-AP0CD97 72 aa2.37□□□□□ -2.03
XRN1YGL173C MSL1P40567 111 aaPredicted RBP2.37□□□□□ -2.03
XRN1YGL173C SCP1Q08873 200 aa2.37□□□□□ -2.03
XRN1YGL173C COX5BP00425 151 aa2.37□□□□□ -2.03
XRN1YGL173C YLR296WQ05898 108 aa2.37□□□□□ -2.03
XRN1YGL173C KEI1Q06346 221 aa2.37□□□□□ -2.03
XRN1YGL173C YOR289WQ12012 251 aaPredicted RBP2.37□□□□□ -2.03
XRN1YGL173C VPS13Q07878 3144 aa2.37□□□□□ -2.03
XRN1YGL173C KRE1P17260 313 aa2.36□□□□□ -2.03
XRN1YGL173C YOR385WQ08909 290 aa2.36□□□□□ -2.03
XRN1YGL173C YGL194C-AQ2V2P6 80 aa2.36□□□□□ -2.03
XRN1YGL173C PCC1Q3E833 88 aa2.36□□□□□ -2.03
XRN1YGL173C DYN1P36022 4092 aa2.36□□□□□ -2.03
XRN1YGL173C YHR032W-AP0C5N6 59 aa2.36□□□□□ -2.03
XRN1YGL173C ELP6Q04868 273 aa2.36□□□□□ -2.03
XRN1YGL173C SOM1Q05676 74 aa2.36□□□□□ -2.03
XRN1YGL173C UPS3Q04006 179 aa2.36□□□□□ -2.03
XRN1YGL173C GPI11Q06636 219 aa2.36□□□□□ -2.03
XRN1YGL173C PAU19P0CE85 124 aa2.35□□□□□ -2.03
XRN1YGL173C PAU21P0CE86 164 aa2.35□□□□□ -2.03
XRN1YGL173C PAU22P0CE87 164 aa2.35□□□□□ -2.03
XRN1YGL173C PAU3P25610 124 aa2.35□□□□□ -2.03
XRN1YGL173C PAM17P36147 197 aa2.35□□□□□ -2.03
XRN1YGL173C YJR146WP47174 117 aa2.35□□□□□ -2.03
XRN1YGL173C YPL261CQ08976 102 aa2.35□□□□□ -2.03
XRN1YGL173C YLR365WQ7LIF2 110 aa2.35□□□□□ -2.03
XRN1YGL173C FAS1P07149 2051 aaKnown RBP2.35□□□□□ -2.03
XRN1YGL173C RPS27AP35997 82 aaKnown RBP2.35□□□□□ -2.03
XRN1YGL173C RPS27BP38711 82 aa2.35□□□□□ -2.03
XRN1YGL173C IGO1P53897 168 aa2.35□□□□□ -2.03
XRN1YGL173C MET31Q03081 177 aa2.35□□□□□ -2.03
XRN1YGL173C SRL3P36167 246 aa2.35□□□□□ -2.03
XRN1YGL173C RPL13BP40212 199 aaKnown RBP2.35□□□□□ -2.03
XRN1YGL173C SNA2P56508 79 aa2.35□□□□□ -2.03
XRN1YGL173C DAN1P47178 298 aa2.35□□□□□ -2.03
XRN1YGL173C FIT3Q08907 204 aa2.35□□□□□ -2.03
XRN1YGL173C YER084WP40057 128 aa2.34□□□□□ -2.03
XRN1YGL173C SNU13P39990 126 aaKnown RBP2.34□□□□□ -2.03
XRN1YGL173C YGR164WP53291 111 aa2.34□□□□□ -2.03
XRN1YGL173C ENV10Q99382 181 aa2.34□□□□□ -2.03
XRN1YGL173C YHR007C-AQ07074 71 aa2.34□□□□□ -2.04
XRN1YGL173C YLR194CQ05777 254 aa2.34□□□□□ -2.04
XRN1YGL173C TMC1Q08422 150 aaPredicted RBP2.34□□□□□ -2.04
XRN1YGL173C YBR219CP38317 127 aa2.33□□□□□ -2.04
XRN1YGL173C FYV12Q08559 129 aa2.33□□□□□ -2.04
XRN1YGL173C YIL014C-AQ02598 104 aa2.33□□□□□ -2.04
XRN1YGL173C SEN15Q04675 128 aa2.33□□□□□ -2.04
XRN1YGL173C YLR363W-AQ3E747 85 aa2.33□□□□□ -2.04
XRN1YGL173C ECM12O13529 151 aa2.32□□□□□ -2.04
XRN1YGL173C COX8P04039 78 aa2.32□□□□□ -2.04
XRN1YGL173C YBR090CP38253 122 aa2.32□□□□□ -2.04
XRN1YGL173C YGL193CP53097 103 aa2.32□□□□□ -2.04
XRN1YGL173C YDL241WQ07738 123 aa2.32□□□□□ -2.04
XRN1YGL173C HMRA1P0CY11 126 aa2.32□□□□□ -2.04
XRN1YGL173C GCV3P39726 170 aaPredicted RBP2.32□□□□□ -2.04
XRN1YGL173C SMX2P40204 77 aaKnown RBP2.32□□□□□ -2.04
XRN1YGL173C YML122CQ03207 126 aa2.32□□□□□ -2.04
XRN1YGL173C YNR077CP53758 84 aa2.32□□□□□ -2.04
XRN1YGL173C CDC39P25655 2108 aaKnown RBP2.32□□□□□ -2.04
XRN1YGL173C YFL065CP43539 102 aa2.32□□□□□ -2.04
XRN1YGL173C YFL051CP43552 160 aa2.32□□□□□ -2.04
XRN1YGL173C YPR096CO13587 100 aa2.31□□□□□ -2.04
XRN1YGL173C PAU12P53343 120 aa2.31□□□□□ -2.04
XRN1YGL173C CCW14O13547 238 aa2.31□□□□□ -2.04
XRN1YGL173C PAU16P35994 123 aa2.31□□□□□ -2.04
XRN1YGL173C PAU15P40585 124 aa2.31□□□□□ -2.04
XRN1YGL173C CWP2P43497 92 aa2.3□□□□□ -2.04
XRN1YGL173C DCV1P43595 202 aa2.3□□□□□ -2.04
XRN1YGL173C PIR5P46999 287 aa2.3□□□□□ -2.04
XRN1YGL173C FLO9P39712 1322 aa2.3□□□□□ -2.04
XRN1YGL173C STF2P16965 84 aa2.3□□□□□ -2.04
XRN1YGL173C FMT1P32785 401 aa2.3□□□□□ -2.04
XRN1YGL173C YKL018C-AQ3E7A7 99 aa2.3□□□□□ -2.04
XRN1YGL173C YCR075W-AQ3E830 75 aa2.3□□□□□ -2.04
XRN1YGL173C YDL157CQ12082 118 aa2.3□□□□□ -2.04
XRN1YGL173C UTR5P32630 166 aa2.29□□□□□ -2.04
XRN1YGL173C RSM19P53733 91 aaPredicted RBP2.29□□□□□ -2.04
XRN1YGL173C PAU2P32612 120 aa2.29□□□□□ -2.04
XRN1YGL173C FIT1Q04433 528 aa2.29□□□□□ -2.04
XRN1YGL173C MIC10Q96VH5 97 aa2.29□□□□□ -2.04
XRN1YGL173C YPR203WQ08994 102 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms