RNA–Protein interactions for RNA: YGL171W

ROK1, Transcript of RNA-dependent ATPase, yeast

Gene ROK1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROK1	YGL171W	RPL40B	P0CH09	128 aa	Known RBP	2.69	□□□□□ -1.98
ROK1	YGL171W	UTR5	P32630	166 aa		2.69	□□□□□ -1.98
ROK1	YGL171W	HPA3	P39979	161 aa		2.69	□□□□□ -1.98
ROK1	YGL171W	YER187W	P40102	141 aa		2.69	□□□□□ -1.98
ROK1	YGL171W	DCV1	P43595	202 aa		2.69	□□□□□ -1.98
ROK1	YGL171W	BRP1	P53194	125 aa		2.69	□□□□□ -1.98
ROK1	YGL171W	POP3	P53833	195 aa	Predicted RBP	2.69	□□□□□ -1.98
ROK1	YGL171W	COA6	Q3E846	104 aa		2.69	□□□□□ -1.98
ROK1	YGL171W	YPR096C	O13587	100 aa		2.68	□□□□□ -1.98
ROK1	YGL171W	HMRA1	P0CY11	126 aa		2.68	□□□□□ -1.98
ROK1	YGL171W	HSP10	P38910	106 aa		2.68	□□□□□ -1.98
ROK1	YGL171W	IPT1	P38954	527 aa		2.68	□□□□□ -1.98
ROK1	YGL171W	YGL149W	P53116	101 aa		2.68	□□□□□ -1.98
ROK1	YGL171W	NAT5	Q08689	176 aa		2.68	□□□□□ -1.98
ROK1	YGL171W	CMC4	Q3E7A9	73 aa		2.68	□□□□□ -1.98
ROK1	YGL171W	RPS25B	P0C0T4	108 aa	Known RBP	2.67	□□□□□ -1.98
ROK1	YGL171W	MRPL11	P36521	249 aa	Predicted RBP	2.67	□□□□□ -1.98
ROK1	YGL171W	SVP26	P38869	228 aa		2.67	□□□□□ -1.98
ROK1	YGL171W	HUR1	P45820	110 aa		2.67	□□□□□ -1.98
ROK1	YGL171W	PAU12	P53343	120 aa		2.67	□□□□□ -1.98
ROK1	YGL171W	IGO1	P53897	168 aa		2.67	□□□□□ -1.98
ROK1	YGL171W	YMR082C	Q04276	118 aa		2.67	□□□□□ -1.98
ROK1	YGL171W	SEN15	Q04675	128 aa		2.67	□□□□□ -1.98
ROK1	YGL171W	RDS3	Q06835	107 aa	Predicted RBP	2.67	□□□□□ -1.98
ROK1	YGL171W	YPL261C	Q08976	102 aa		2.67	□□□□□ -1.98
ROK1	YGL171W	RPS25A	Q3E792	108 aa	Predicted RBP	2.67	□□□□□ -1.98
ROK1	YGL171W	FUN14	P18411	198 aa		2.66	□□□□□ -1.98
ROK1	YGL171W	RPL13B	P40212	199 aa	Known RBP	2.66	□□□□□ -1.98
ROK1	YGL171W	EMC5	P40540	141 aa		2.66	□□□□□ -1.98
ROK1	YGL171W	MSL1	P40567	111 aa	Predicted RBP	2.66	□□□□□ -1.98
ROK1	YGL171W	YFL051C	P43552	160 aa		2.66	□□□□□ -1.98
ROK1	YGL171W	YOL131W	Q08270	108 aa		2.66	□□□□□ -1.98
ROK1	YGL171W	YKL018C-A	Q3E7A7	99 aa		2.66	□□□□□ -1.98
ROK1	YGL171W	AGA2	P32781	87 aa		2.66	□□□□□ -1.98
ROK1	YGL171W	MIX14	Q04341	121 aa		2.66	□□□□□ -1.98
ROK1	YGL171W	PAU2	P32612	120 aa		2.65	□□□□□ -1.99
ROK1	YGL171W	YPL067C	Q02754	198 aa		2.65	□□□□□ -1.99
ROK1	YGL171W	DAD1	Q12248	94 aa		2.65	□□□□□ -1.99
ROK1	YGL171W	VPS13	Q07878	3144 aa		2.64	□□□□□ -1.99
ROK1	YGL171W	HSP150	P32478	413 aa		2.64	□□□□□ -1.99
ROK1	YGL171W	PDX3	P38075	228 aa	Known RBP	2.64	□□□□□ -1.99
ROK1	YGL171W	YEL014C	P39999	101 aa		2.64	□□□□□ -1.99
ROK1	YGL171W	YJL144W	P47009	104 aa		2.64	□□□□□ -1.99
ROK1	YGL171W	AVO2	Q04749	426 aa		2.64	□□□□□ -1.99
ROK1	YGL171W	YLR296W	Q05898	108 aa		2.64	□□□□□ -1.99
ROK1	YGL171W	GPI11	Q06636	219 aa		2.64	□□□□□ -1.99
ROK1	YGL171W	HRT1	Q08273	121 aa		2.64	□□□□□ -1.99
ROK1	YGL171W	MHF2	Q3E829	80 aa		2.64	□□□□□ -1.99
ROK1	YGL171W	ECM12	O13529	151 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	RTC6	O14464	93 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	SRB6	P32570	121 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	SRX1	P36077	127 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	YHR022C	P38763	256 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	VMA21	P41806	77 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	RSM19	P53733	91 aa	Predicted RBP	2.63	□□□□□ -1.99
ROK1	YGL171W	MET31	Q03081	177 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	RRT15	Q3E811	62 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	OST5	Q92316	86 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	PAU24	P38155	120 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	CYT2	Q00873	224 aa		2.63	□□□□□ -1.99
ROK1	YGL171W	YPR117W	Q06116	2489 aa		2.62	□□□□□ -1.99
ROK1	YGL171W	YKR045C	P36138	183 aa		2.62	□□□□□ -1.99
ROK1	YGL171W	YIL014C-A	Q02598	104 aa		2.61	□□□□□ -1.99
ROK1	YGL171W	PCC1	Q3E833	88 aa		2.61	□□□□□ -1.99
ROK1	YGL171W	CDC39	P25655	2108 aa	Known RBP	2.61	□□□□□ -1.99
ROK1	YGL171W	FAB1	P34756	2278 aa		2.61	□□□□□ -1.99
ROK1	YGL171W	SOD1	P00445	154 aa	Known RBP	2.6	□□□□□ -1.99
ROK1	YGL171W	YIR020C	P40575	100 aa		2.6	□□□□□ -1.99
ROK1	YGL171W	YJL197C-A	P0C5P0	93 aa		2.6	□□□□□ -1.99
ROK1	YGL171W	PAU19	P0CE85	124 aa		2.6	□□□□□ -1.99
ROK1	YGL171W	PAU3	P25610	124 aa		2.6	□□□□□ -1.99
ROK1	YGL171W	ATG8	P38182	117 aa	RIP-Chip data	2.6	□□□□□ -1.99	not detected
ROK1	YGL171W	YLR194C	Q05777	254 aa		2.6	□□□□□ -1.99
ROK1	YGL171W	EMC6	Q12431	108 aa		2.6	□□□□□ -1.99
ROK1	YGL171W	BEM2	P39960	2167 aa	Known RBP	2.59	□□□□□ -1.99
ROK1	YGL171W	FMT1	P32785	401 aa		2.59	□□□□□ -2
ROK1	YGL171W	YHR138C	P38841	114 aa	Predicted RBP	2.59	□□□□□ -2
ROK1	YGL171W	SNN1	P48232	102 aa		2.59	□□□□□ -2
ROK1	YGL171W	COA4	Q05809	96 aa		2.59	□□□□□ -2
ROK1	YGL171W	RPB7	P34087	171 aa		2.58	□□□□□ -2
ROK1	YGL171W	YDR042C	Q03205	200 aa		2.58	□□□□□ -2
ROK1	YGL171W	MHF1	Q3E835	90 aa		2.58	□□□□□ -2
ROK1	YGL171W	RPL36B	O14455	100 aa	Known RBP	2.57	□□□□□ -2
ROK1	YGL171W	RPL36A	P05745	100 aa	Predicted RBP	2.57	□□□□□ -2
ROK1	YGL171W	CYB5	P40312	120 aa		2.57	□□□□□ -2
ROK1	YGL171W	STT4	P37297	1900 aa		2.57	□□□□□ -2
ROK1	YGL171W	QCR8	P08525	94 aa		2.57	□□□□□ -2
ROK1	YGL171W	COX23	P38824	151 aa		2.57	□□□□□ -2
ROK1	YGL171W	YIL086C	P40503	102 aa		2.57	□□□□□ -2
ROK1	YGL171W	RGM1	Q00453	211 aa		2.57	□□□□□ -2
ROK1	YGL171W	YHR007C-A	Q07074	71 aa		2.57	□□□□□ -2
ROK1	YGL171W	PAU16	P35994	123 aa		2.56	□□□□□ -2
ROK1	YGL171W	PAU15	P40585	124 aa		2.56	□□□□□ -2
ROK1	YGL171W	CWP2	P43497	92 aa		2.56	□□□□□ -2
ROK1	YGL171W	SUS1	Q6WNK7	96 aa		2.56	□□□□□ -2
ROK1	YGL171W	SLH1	P53327	1967 aa	Known RBP	2.55	□□□□□ -2
ROK1	YGL171W	YHR213W	P0CI67	198 aa		2.55	□□□□□ -2
ROK1	YGL171W	NRG2	P38082	220 aa		2.55	□□□□□ -2
ROK1	YGL171W	DSE2	P38844	325 aa		2.55	□□□□□ -2
ROK1	YGL171W	DAN1	P47178	298 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms