RNA–Protein interactions for RNA: YFR021W

ATG18, Transcript of Phosphoinositide binding protein, yeast

Gene ATG18, Length 1,503 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG18	YFR021W	COA3	Q3E7B2	85 aa		3.24	□□□□□ -1.89
ATG18	YFR021W	PAU21	P0CE86	164 aa		3.24	□□□□□ -1.89
ATG18	YFR021W	PAU22	P0CE87	164 aa		3.24	□□□□□ -1.89
ATG18	YFR021W	YCL042W	P25572	119 aa		3.24	□□□□□ -1.89
ATG18	YFR021W	AIM18	P38884	321 aa		3.24	□□□□□ -1.89
ATG18	YFR021W	SNF11	P38956	169 aa		3.24	□□□□□ -1.89
ATG18	YFR021W	PAM16	P42949	149 aa		3.24	□□□□□ -1.89
ATG18	YFR021W	YBR242W	P38331	238 aa		3.23	□□□□□ -1.89
ATG18	YFR021W	MHF1	Q3E835	90 aa		3.23	□□□□□ -1.89
ATG18	YFR021W	UBR2	Q07963	1872 aa		3.22	□□□□□ -1.89
ATG18	YFR021W	FPR1	P20081	114 aa	Known RBP	3.22	□□□□□ -1.89
ATG18	YFR021W	YCR099C	P25657	155 aa		3.22	□□□□□ -1.89
ATG18	YFR021W	YFL051C	P43552	160 aa		3.22	□□□□□ -1.89
ATG18	YFR021W	YFL065C	P43539	102 aa		3.21	□□□□□ -1.9
ATG18	YFR021W	YFR035C	P43608	114 aa		3.21	□□□□□ -1.9
ATG18	YFR021W	PRE1	P22141	198 aa	Known RBP	3.2	□□□□□ -1.9
ATG18	YFR021W	TDA2	P40045	126 aa		3.2	□□□□□ -1.9
ATG18	YFR021W	GPI19	Q04082	140 aa		3.2	□□□□□ -1.9
ATG18	YFR021W	MHF2	Q3E829	80 aa		3.2	□□□□□ -1.9
ATG18	YFR021W	LAA1	P39526	2014 aa		3.2	□□□□□ -1.9
ATG18	YFR021W	HYP2	P23301	157 aa	Known RBP	3.19	□□□□□ -1.9
ATG18	YFR021W	NHP10	Q03435	203 aa		3.19	□□□□□ -1.9
ATG18	YFR021W	YKL018C-A	Q3E7A7	99 aa		3.19	□□□□□ -1.9
ATG18	YFR021W	ECM29	P38737	1868 aa		3.19	□□□□□ -1.9
ATG18	YFR021W	HAP3	P13434	144 aa		3.18	□□□□□ -1.9
ATG18	YFR021W	SWC7	Q06707	132 aa		3.18	□□□□□ -1.9
ATG18	YFR021W	VAR1	P02381	398 aa		3.17	□□□□□ -1.9
ATG18	YFR021W	YCR101C	P25607	182 aa		3.17	□□□□□ -1.9
ATG18	YFR021W	YMR321C	Q04898	105 aa		3.17	□□□□□ -1.9
ATG18	YFR021W	ATG8	P38182	117 aa	RIP-Chip data	3.16	□□□□□ -1.9	not detected
ATG18	YFR021W	YBR027C	P38220	110 aa		3.16	□□□□□ -1.9
ATG18	YFR021W	RPL40A	P0CH08	128 aa	Known RBP	3.15	□□□□□ -1.9
ATG18	YFR021W	RPL40B	P0CH09	128 aa	Known RBP	3.15	□□□□□ -1.9
ATG18	YFR021W	MRPL11	P36521	249 aa	Predicted RBP	3.15	□□□□□ -1.9
ATG18	YFR021W	CDC39	P25655	2108 aa	Known RBP	3.15	□□□□□ -1.91
ATG18	YFR021W	YOL131W	Q08270	108 aa		3.14	□□□□□ -1.91
ATG18	YFR021W	RTC6	O14464	93 aa		3.14	□□□□□ -1.91
ATG18	YFR021W	YGL014C-A	P0C5N1	53 aa		3.14	□□□□□ -1.91
ATG18	YFR021W	MRPL15	P36523	253 aa		3.14	□□□□□ -1.91
ATG18	YFR021W	SED1	Q01589	338 aa		3.14	□□□□□ -1.91
ATG18	YFR021W	FIT1	Q04433	528 aa		3.14	□□□□□ -1.91
ATG18	YFR021W	VAM10	Q08474	114 aa		3.14	□□□□□ -1.91
ATG18	YFR021W	SUS1	Q6WNK7	96 aa		3.14	□□□□□ -1.91
ATG18	YFR021W	EMP24	P32803	203 aa	Known RBP	3.13	□□□□□ -1.91
ATG18	YFR021W	GNA1	P43577	159 aa	Predicted RBP	3.13	□□□□□ -1.91
ATG18	YFR021W	YHR213W-A	Q8TGT4	77 aa		3.13	□□□□□ -1.91
ATG18	YFR021W	YHR130C	P38834	111 aa		3.12	□□□□□ -1.91
ATG18	YFR021W	IGO1	P53897	168 aa		3.12	□□□□□ -1.91
ATG18	YFR021W	YLR296W	Q05898	108 aa		3.12	□□□□□ -1.91
ATG18	YFR021W	RPL33A	P05744	107 aa	Known RBP	3.11	□□□□□ -1.91
ATG18	YFR021W	YHR213W	P0CI67	198 aa		3.11	□□□□□ -1.91
ATG18	YFR021W	YPR203W	Q08994	102 aa		3.11	□□□□□ -1.91
ATG18	YFR021W	SEN15	Q04675	128 aa		3.1	□□□□□ -1.91
ATG18	YFR021W	YGL194C-A	Q2V2P6	80 aa		3.1	□□□□□ -1.91
ATG18	YFR021W	RPL36B	O14455	100 aa	Known RBP	3.09	□□□□□ -1.91
ATG18	YFR021W	RPL36A	P05745	100 aa	Predicted RBP	3.09	□□□□□ -1.91
ATG18	YFR021W	YGR164W	P53291	111 aa		3.09	□□□□□ -1.91
ATG18	YFR021W	ACC1	Q00955	2233 aa	Known RBP	3.09	□□□□□ -1.92
ATG18	YFR021W	YEA6	P39953	335 aa		3.09	□□□□□ -1.92
ATG18	YFR021W	PAU12	P53343	120 aa		3.09	□□□□□ -1.92
ATG18	YFR021W	YPL261C	Q08976	102 aa		3.09	□□□□□ -1.92
ATG18	YFR021W	YLR365W	Q7LIF2	110 aa		3.09	□□□□□ -1.92
ATG18	YFR021W	HAP2	P06774	265 aa		3.08	□□□□□ -1.92
ATG18	YFR021W	YBR090C	P38253	122 aa		3.08	□□□□□ -1.92
ATG18	YFR021W	SWM2	P40342	146 aa		3.08	□□□□□ -1.92
ATG18	YFR021W	LST8	P41318	303 aa		3.08	□□□□□ -1.92
ATG18	YFR021W	AQY2	P0CD90	149 aa		3.07	□□□□□ -1.92
ATG18	YFR021W	YER187W	P40102	141 aa		3.07	□□□□□ -1.92
ATG18	YFR021W	YMR122C	Q03879	124 aa		3.07	□□□□□ -1.92
ATG18	YFR021W	YMR103C	Q04436	120 aa		3.07	□□□□□ -1.92
ATG18	YFR021W	ZEO1	Q08245	113 aa		3.07	□□□□□ -1.92
ATG18	YFR021W	YHR212W-A	P0CX91	67 aa		3.06	□□□□□ -1.92
ATG18	YFR021W	SRB6	P32570	121 aa		3.06	□□□□□ -1.92
ATG18	YFR021W	YIL014C-A	Q02598	104 aa		3.06	□□□□□ -1.92
ATG18	YFR021W	YLR194C	Q05777	254 aa		3.06	□□□□□ -1.92
ATG18	YFR021W	YOR289W	Q12012	251 aa	Predicted RBP	3.06	□□□□□ -1.92
ATG18	YFR021W	HPA2	Q06592	156 aa		3.05	□□□□□ -1.92
ATG18	YFR021W	OST5	Q92316	86 aa		3.05	□□□□□ -1.92
ATG18	YFR021W	UBC5	P15732	148 aa		3.04	□□□□□ -1.92
ATG18	YFR021W	YHL037C	P38733	133 aa		3.04	□□□□□ -1.92
ATG18	YFR021W	SNN1	P48232	102 aa		3.04	□□□□□ -1.92
ATG18	YFR021W	PRM3	Q08931	133 aa		3.04	□□□□□ -1.92
ATG18	YFR021W	DAD1	Q12248	94 aa		3.04	□□□□□ -1.92
ATG18	YFR021W	PCC1	Q3E833	88 aa		3.04	□□□□□ -1.92
ATG18	YFR021W	PFY1	P07274	126 aa		3.03	□□□□□ -1.92
ATG18	YFR021W	PAU24	P38155	120 aa		3.03	□□□□□ -1.92
ATG18	YFR021W	AIM4	P38305	123 aa	Predicted RBP	3.03	□□□□□ -1.92
ATG18	YFR021W	GTT1	P40582	234 aa		3.03	□□□□□ -1.92
ATG18	YFR021W	VMA9	Q3E7B6	73 aa		3.03	□□□□□ -1.92
ATG18	YFR021W	SLH1	P53327	1967 aa	Known RBP	3.03	□□□□□ -1.92
ATG18	YFR021W	YJL197C-A	P0C5P0	93 aa		3.03	□□□□□ -1.92
ATG18	YFR021W	MRP17	P28778	131 aa		3.03	□□□□□ -1.92
ATG18	YFR021W	PAU2	P32612	120 aa		3.02	□□□□□ -1.93
ATG18	YFR021W	GCV3	P39726	170 aa	Predicted RBP	3.02	□□□□□ -1.93
ATG18	YFR021W	SCP1	Q08873	200 aa		3.02	□□□□□ -1.93
ATG18	YFR021W	STT4	P37297	1900 aa		3.02	□□□□□ -1.93
ATG18	YFR021W	YFR010W-A	P0C5N0	62 aa		3.01	□□□□□ -1.93
ATG18	YFR021W	COX9	P07255	59 aa		2.99	□□□□□ -1.93
ATG18	YFR021W	YPR145C-A	Q2V2P0	78 aa		2.99	□□□□□ -1.93
ATG18	YFR021W	SSS1	P35179	80 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms