RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W RPB7P34087 171 aa1.27□□□□□ -2.21
NIC96YFR002W ETR1P38071 380 aa1.27□□□□□ -2.21
NIC96YFR002W NRG2P38082 220 aa1.27□□□□□ -2.21
NIC96YFR002W DIE2P50076 525 aa1.27□□□□□ -2.21
NIC96YFR002W SPG1P50088 95 aa1.27□□□□□ -2.21
NIC96YFR002W ATP19P81451 68 aa1.27□□□□□ -2.21
NIC96YFR002W SOM1Q05676 74 aa1.27□□□□□ -2.21
NIC96YFR002W KEI1Q06346 221 aa1.27□□□□□ -2.21
NIC96YFR002W YLR042CQ07990 161 aa1.27□□□□□ -2.21
NIC96YFR002W YDL157CQ12082 118 aa1.27□□□□□ -2.21
NIC96YFR002W FYV7Q12247 151 aa1.27□□□□□ -2.21
NIC96YFR002W YMR030W-AQ3E760 96 aa1.27□□□□□ -2.21
NIC96YFR002W SFT2P38166 215 aa1.27□□□□□ -2.21
NIC96YFR002W HPA3P39979 161 aa1.27□□□□□ -2.21
NIC96YFR002W YHR007C-AQ07074 71 aa1.27□□□□□ -2.21
NIC96YFR002W SRL3P36167 246 aa1.26□□□□□ -2.21
NIC96YFR002W YLR162WQ06235 118 aa1.26□□□□□ -2.21
NIC96YFR002W SCP1Q08873 200 aa1.26□□□□□ -2.21
NIC96YFR002W OCA6Q12454 224 aa1.26□□□□□ -2.21
NIC96YFR002W HUT1Q12520 339 aa1.26□□□□□ -2.21
NIC96YFR002W YBR219CP38317 127 aa1.26□□□□□ -2.21
NIC96YFR002W RPB11P38902 120 aa1.26□□□□□ -2.21
NIC96YFR002W PEP8P40335 379 aa1.26□□□□□ -2.21
NIC96YFR002W RTR2Q12378 196 aa1.26□□□□□ -2.21
NIC96YFR002W RPS25BP0C0T4 108 aaKnown RBP1.25□□□□□ -2.21
NIC96YFR002W YGL041W-AP0C5N3 154 aa1.25□□□□□ -2.21
NIC96YFR002W YER039C-AP0CD97 72 aa1.25□□□□□ -2.21
NIC96YFR002W YEL008WP40001 126 aa1.25□□□□□ -2.21
NIC96YFR002W CWC27Q02770 301 aa1.25□□□□□ -2.21
NIC96YFR002W MIX14Q04341 121 aa1.25□□□□□ -2.21
NIC96YFR002W RPS25AQ3E792 108 aaPredicted RBP1.25□□□□□ -2.21
NIC96YFR002W YJL197C-AP0C5P0 93 aa1.25□□□□□ -2.21
NIC96YFR002W HSP150P32478 413 aa1.25□□□□□ -2.21
NIC96YFR002W ECM31P38122 312 aa1.25□□□□□ -2.21
NIC96YFR002W YAR029WP39549 74 aa1.25□□□□□ -2.21
NIC96YFR002W BAT2P47176 376 aaKnown RBP1.25□□□□□ -2.21
NIC96YFR002W VAR1P02381 398 aa1.24□□□□□ -2.21
NIC96YFR002W QCR10P37299 77 aa1.24□□□□□ -2.21
NIC96YFR002W IPT1P38954 527 aa1.24□□□□□ -2.21
NIC96YFR002W YEL014CP39999 101 aa1.24□□□□□ -2.21
NIC96YFR002W YFL051CP43552 160 aa1.24□□□□□ -2.21
NIC96YFR002W YPR153WQ06537 140 aa1.24□□□□□ -2.21
NIC96YFR002W FCF2Q12035 217 aaPredicted RBP1.24□□□□□ -2.21
NIC96YFR002W RPS12P48589 143 aaKnown RBP1.24□□□□□ -2.21
NIC96YFR002W YGL194C-AQ2V2P6 80 aa1.24□□□□□ -2.21
NIC96YFR002W TAR1Q8TGM6 124 aa1.24□□□□□ -2.21
NIC96YFR002W ANB1P19211 157 aa1.23□□□□□ -2.21
NIC96YFR002W YKL044WP36092 106 aa1.23□□□□□ -2.21
NIC96YFR002W YBR242WP38331 238 aa1.23□□□□□ -2.21
NIC96YFR002W HYR1P40581 163 aaKnown RBP1.23□□□□□ -2.21
NIC96YFR002W YAE1P47118 141 aaPredicted RBP1.23□□□□□ -2.21
NIC96YFR002W ZEO1Q08245 113 aa1.23□□□□□ -2.21
NIC96YFR002W SIP18P50263 79 aa1.23□□□□□ -2.21
NIC96YFR002W AUA1P32450 94 aa1.22□□□□□ -2.21
NIC96YFR002W PAM16P42949 149 aa1.22□□□□□ -2.21
NIC96YFR002W SED1Q01589 338 aa1.22□□□□□ -2.21
NIC96YFR002W MET31Q03081 177 aa1.22□□□□□ -2.21
NIC96YFR002W GPI11Q06636 219 aa1.22□□□□□ -2.21
NIC96YFR002W SNF11P38956 169 aa1.22□□□□□ -2.21
NIC96YFR002W DCV1P43595 202 aa1.22□□□□□ -2.21
NIC96YFR002W YGL230CP53074 147 aa1.22□□□□□ -2.21
NIC96YFR002W YGL149WP53116 101 aa1.22□□□□□ -2.21
NIC96YFR002W KTI11Q3E840 82 aa1.22□□□□□ -2.21
NIC96YFR002W PAU21P0CE86 164 aa1.21□□□□□ -2.22
NIC96YFR002W PAU22P0CE87 164 aa1.21□□□□□ -2.22
NIC96YFR002W FUN14P18411 198 aa1.21□□□□□ -2.22
NIC96YFR002W ERV14P53173 138 aa1.21□□□□□ -2.22
NIC96YFR002W BRP1P53194 125 aa1.21□□□□□ -2.22
NIC96YFR002W RCE1Q03530 315 aa1.21□□□□□ -2.22
NIC96YFR002W YCR075W-AQ3E830 75 aa1.21□□□□□ -2.22
NIC96YFR002W QCR8P08525 94 aa1.21□□□□□ -2.22
NIC96YFR002W MRPL44P19956 98 aa1.21□□□□□ -2.22
NIC96YFR002W SEC59P20048 519 aa1.21□□□□□ -2.22
NIC96YFR002W YPL067CQ02754 198 aa1.21□□□□□ -2.22
NIC96YFR002W NAT5Q08689 176 aa1.21□□□□□ -2.22
NIC96YFR002W YNL146C-AQ3E7Z1 64 aa1.21□□□□□ -2.22
NIC96YFR002W NHP10Q03435 203 aa1.2□□□□□ -2.22
NIC96YFR002W GPI19Q04082 140 aa1.2□□□□□ -2.22
NIC96YFR002W COA3Q3E7B2 85 aa1.2□□□□□ -2.22
NIC96YFR002W RTC6O14464 93 aa1.2□□□□□ -2.22
NIC96YFR002W HSP10P38910 106 aa1.2□□□□□ -2.22
NIC96YFR002W TDA2P40045 126 aa1.2□□□□□ -2.22
NIC96YFR002W RPL13BP40212 199 aaKnown RBP1.2□□□□□ -2.22
NIC96YFR002W MPC1P53157 130 aaKnown RBP1.2□□□□□ -2.22
NIC96YFR002W RPL13AQ12690 199 aaPredicted RBP1.2□□□□□ -2.22
NIC96YFR002W YHR130CP38834 111 aa1.19□□□□□ -2.22
NIC96YFR002W YGL010WP25338 174 aa1.19□□□□□ -2.22
NIC96YFR002W YCR099CP25657 155 aa1.19□□□□□ -2.22
NIC96YFR002W EMP24P32803 203 aaKnown RBP1.19□□□□□ -2.22
NIC96YFR002W ATG8P38182 117 aaRIP-Chip data1.19□□□□□ -2.22not detected
NIC96YFR002W NCE101Q02820 53 aa1.19□□□□□ -2.22
NIC96YFR002W PRM3Q08931 133 aa1.19□□□□□ -2.22
NIC96YFR002W BPH1P25356 2167 aa1.18□□□□□ -2.22
NIC96YFR002W YFL065CP43539 102 aa1.18□□□□□ -2.22
NIC96YFR002W PAU12P53343 120 aa1.18□□□□□ -2.22
NIC96YFR002W YMR103CQ04436 120 aa1.18□□□□□ -2.22
NIC96YFR002W MED11Q99278 115 aa1.18□□□□□ -2.22
NIC96YFR002W YGL014C-AP0C5N1 53 aa1.17□□□□□ -2.22
NIC96YFR002W HAP3P13434 144 aa1.17□□□□□ -2.22
NIC96YFR002W UBC5P15732 148 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 523.6 ms