RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	YMR122W-A	Q3E842	84 aa		2.65	□□□□□ -1.99
UBC8	YEL012W	YBR292C	P38357	123 aa		2.64	□□□□□ -1.99
UBC8	YEL012W	ARC15	P40518	154 aa	RIP-Chip data	2.64	□□□□□ -1.99	not detected
UBC8	YEL012W	ERI1	P62651	68 aa	Known RBP	2.64	□□□□□ -1.99
UBC8	YEL012W	PMP3	P87284	55 aa		2.64	□□□□□ -1.99
UBC8	YEL012W	ARL3	Q02804	198 aa		2.64	□□□□□ -1.99
UBC8	YEL012W	DCN1	Q12395	269 aa		2.64	□□□□□ -1.99
UBC8	YEL012W	YLR361C-A	Q3E795	98 aa		2.64	□□□□□ -1.99
UBC8	YEL012W	YOR304C-A	O14468	76 aa		2.63	□□□□□ -1.99
UBC8	YEL012W	MAG1	P22134	296 aa	Known RBP	2.63	□□□□□ -1.99
UBC8	YEL012W	YAL064W	P39711	94 aa		2.63	□□□□□ -1.99
UBC8	YEL012W	YGL088W	P53151	121 aa		2.63	□□□□□ -1.99
UBC8	YEL012W	YGR026W	P53217	278 aa		2.63	□□□□□ -1.99
UBC8	YEL012W	SAE3	P89114	91 aa		2.63	□□□□□ -1.99
UBC8	YEL012W	YKL183C-A	Q3E765	70 aa		2.63	□□□□□ -1.99
UBC8	YEL012W	PCC1	Q3E833	88 aa		2.63	□□□□□ -1.99
UBC8	YEL012W	YPR010C-A	A5Z2X5	72 aa		2.62	□□□□□ -1.99
UBC8	YEL012W	TEM1	P38987	245 aa		2.62	□□□□□ -1.99
UBC8	YEL012W	GCV3	P39726	170 aa	Predicted RBP	2.62	□□□□□ -1.99
UBC8	YEL012W	MOG1	P47123	218 aa		2.62	□□□□□ -1.99
UBC8	YEL012W	SNA2	P56508	79 aa		2.62	□□□□□ -1.99
UBC8	YEL012W	YCL001W-A	P87012	153 aa		2.62	□□□□□ -1.99
UBC8	YEL012W	UPS3	Q04006	179 aa		2.62	□□□□□ -1.99
UBC8	YEL012W	YLR194C	Q05777	254 aa		2.62	□□□□□ -1.99
UBC8	YEL012W	ZEO1	Q08245	113 aa		2.62	□□□□□ -1.99
UBC8	YEL012W	YBR013C	P38215	129 aa		2.61	□□□□□ -1.99
UBC8	YEL012W	SMD3	P43321	101 aa	Known RBP	2.61	□□□□□ -1.99
UBC8	YEL012W	JAC1	P53193	184 aa		2.61	□□□□□ -1.99
UBC8	YEL012W	PAU4	P53427	120 aa		2.61	□□□□□ -1.99
UBC8	YEL012W	RPS28B	P0C0X0	67 aa	Known RBP	2.6	□□□□□ -1.99
UBC8	YEL012W	YBR121C-A	P0C5L4	52 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU1	P0CE88	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU14	P0CE89	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU6	P0CE90	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU18	P0CE91	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU8	P0CE92	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU11	P0CE93	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	UGX2	P32772	223 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	YBR209W	P38311	105 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	SHG1	P38337	142 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU13	P38725	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU10	Q03050	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU20	Q08322	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	YOR105W	Q08504	108 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	SMT3	Q12306	101 aa	Known RBP	2.6	□□□□□ -1.99
UBC8	YEL012W	COX19	Q3E731	98 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	PAU9	Q3E770	120 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.6	□□□□□ -1.99
UBC8	YEL012W	ISD11	Q6Q560	94 aa		2.6	□□□□□ -1.99
UBC8	YEL012W	MRPL31	P14063	131 aa	Predicted RBP	2.59	□□□□□ -1.99
UBC8	YEL012W	YHR140W	P38842	239 aa		2.59	□□□□□ -1.99
UBC8	YEL012W	RPB11	P38902	120 aa		2.59	□□□□□ -1.99
UBC8	YEL012W	GTT1	P40582	234 aa		2.59	□□□□□ -1.99
UBC8	YEL012W	ATP19	P81451	68 aa		2.59	□□□□□ -1.99
UBC8	YEL012W	TIR1	P10863	254 aa		2.58	□□□□□ -2
UBC8	YEL012W	CYB5	P40312	120 aa		2.58	□□□□□ -2
UBC8	YEL012W	GPI19	Q04082	140 aa		2.58	□□□□□ -2
UBC8	YEL012W	TVP18	Q04767	167 aa		2.58	□□□□□ -2
UBC8	YEL012W	NAT3	Q06504	195 aa		2.58	□□□□□ -2
UBC8	YEL012W	YIR021W-A	Q3E739	70 aa		2.58	□□□□□ -2
UBC8	YEL012W	RPS22A	P0C0W1	130 aa	Known RBP	2.57	□□□□□ -2
UBC8	YEL012W	KRE1	P17260	313 aa		2.57	□□□□□ -2
UBC8	YEL012W	MRP49	P32388	137 aa		2.57	□□□□□ -2
UBC8	YEL012W	YBR219C	P38317	127 aa		2.57	□□□□□ -2
UBC8	YEL012W	SPC25	P40014	221 aa		2.57	□□□□□ -2
UBC8	YEL012W	AIM19	P40502	157 aa		2.57	□□□□□ -2
UBC8	YEL012W	DCV1	P43595	202 aa		2.57	□□□□□ -2
UBC8	YEL012W	THG1	P53215	237 aa	Known RBP	2.57	□□□□□ -2
UBC8	YEL012W	ABF2	Q02486	183 aa		2.57	□□□□□ -2
UBC8	YEL012W	YOR268C	Q08734	132 aa		2.57	□□□□□ -2
UBC8	YEL012W	SLO1	Q3E784	85 aa		2.57	□□□□□ -2
UBC8	YEL012W	YBL008W-A	Q3E821	79 aa		2.57	□□□□□ -2
UBC8	YEL012W	PRE1	P22141	198 aa	Known RBP	2.56	□□□□□ -2
UBC8	YEL012W	HYP2	P23301	157 aa	Known RBP	2.56	□□□□□ -2
UBC8	YEL012W	SRP21	P32342	167 aa		2.56	□□□□□ -2
UBC8	YEL012W	YKR032W	P36127	104 aa		2.56	□□□□□ -2
UBC8	YEL012W	RPC10	P40422	70 aa		2.56	□□□□□ -2
UBC8	YEL012W	GLC8	P41818	229 aa		2.56	□□□□□ -2
UBC8	YEL012W	YNL184C	P53876	108 aa		2.56	□□□□□ -2
UBC8	YEL012W	SCM4	P32564	187 aa		2.55	□□□□□ -2
UBC8	YEL012W	RPF1	P38805	295 aa	Known RBP	2.55	□□□□□ -2
UBC8	YEL012W	YPL257W	Q08974	193 aa		2.55	□□□□□ -2
UBC8	YEL012W	FSF1	Q12029	327 aa	Known RBP	2.55	□□□□□ -2
UBC8	YEL012W	NTF2	P33331	125 aa	Known RBP	2.54	□□□□□ -2
UBC8	YEL012W	MRPL24	P36525	258 aa	Predicted RBP	2.54	□□□□□ -2
UBC8	YEL012W	VMA7	P39111	118 aa		2.54	□□□□□ -2
UBC8	YEL012W	YER076C	P40049	302 aa		2.54	□□□□□ -2
UBC8	YEL012W	YJL144W	P47009	104 aa		2.54	□□□□□ -2
UBC8	YEL012W	PAM17	P36147	197 aa		2.53	□□□□□ -2
UBC8	YEL012W	YGL149W	P53116	101 aa		2.53	□□□□□ -2
UBC8	YEL012W	DAD3	P69850	94 aa		2.53	□□□□□ -2
UBC8	YEL012W	APS2	Q00381	147 aa		2.53	□□□□□ -2
UBC8	YEL012W	PKR1	Q03880	122 aa	Known RBP	2.53	□□□□□ -2
UBC8	YEL012W	YLR050C	Q12155	161 aa	Known RBP	2.53	□□□□□ -2
UBC8	YEL012W	YHR139C-A	O13536	103 aa		2.52	□□□□□ -2.01
UBC8	YEL012W	MRPL44	P19956	98 aa		2.52	□□□□□ -2.01
UBC8	YEL012W	YKR041W	P36134	250 aa		2.52	□□□□□ -2.01
UBC8	YEL012W	ERV14	P53173	138 aa		2.52	□□□□□ -2.01
UBC8	YEL012W	ECM12	O13529	151 aa		2.51	□□□□□ -2.01
UBC8	YEL012W	YEL008W	P40001	126 aa		2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms