RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W SPI1P40092 148 aa6.16□□□□□ -1.42
YRF1-1YDR545W RPL39P04650 51 aa6.15□□□□□ -1.42
YRF1-1YDR545W YKL097CP34245 136 aa6.15□□□□□ -1.42
YRF1-1YDR545W YER039C-AP0CD97 72 aa6.15□□□□□ -1.43
YRF1-1YDR545W MOH1P38191 138 aa6.15□□□□□ -1.43
YRF1-1YDR545W RPS26BP39939 119 aaKnown RBP6.15□□□□□ -1.43
YRF1-1YDR545W YRA2P36036 203 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
YRF1-1YDR545W YCR050CP25630 102 aa6.14□□□□□ -1.43
YRF1-1YDR545W MOT3P54785 490 aaKnown RBP6.14□□□□□ -1.43
YRF1-1YDR545W YDR119W-AQ2V2P9 66 aa6.14□□□□□ -1.43
YRF1-1YDR545W AGA1P32323 725 aa6.14□□□□□ -1.43
YRF1-1YDR545W SIM1P40472 476 aa6.14□□□□□ -1.43
YRF1-1YDR545W PRM7Q12459 698 aa6.14□□□□□ -1.43
YRF1-1YDR545W VTC1P40046 129 aaRIP-Chip data6.13□□□□□ -1.43not detected
YRF1-1YDR545W PPT2Q12036 173 aa6.13□□□□□ -1.43
YRF1-1YDR545W RPL15AP05748 204 aaKnown RBP6.12□□□□□ -1.43
YRF1-1YDR545W BET1P22804 142 aa6.12□□□□□ -1.43
YRF1-1YDR545W POR2P40478 281 aa6.12□□□□□ -1.43
YRF1-1YDR545W YGR045CP53229 120 aa6.12□□□□□ -1.43
YRF1-1YDR545W ADH5P38113 351 aaKnown RBP6.12□□□□□ -1.43
YRF1-1YDR545W QCR8P08525 94 aa6.12□□□□□ -1.43
YRF1-1YDR545W RPL2AP0CX45 254 aaKnown RBP6.12□□□□□ -1.43
YRF1-1YDR545W RPL2BP0CX46 254 aaKnown RBP6.12□□□□□ -1.43
YRF1-1YDR545W YPL038W-AQ3E7B4 63 aa6.12□□□□□ -1.43
YRF1-1YDR545W YEL067CP39978 195 aa6.12□□□□□ -1.43
YRF1-1YDR545W YGR219WP53307 113 aa6.12□□□□□ -1.43
YRF1-1YDR545W IRC23Q08416 157 aa6.12□□□□□ -1.43
YRF1-1YDR545W SHU1P38751 150 aa6.12□□□□□ -1.43
YRF1-1YDR545W BEM2P39960 2167 aaKnown RBP6.11□□□□□ -1.43
YRF1-1YDR545W YNL190WP53872 204 aa6.11□□□□□ -1.43
YRF1-1YDR545W SHH4Q06236 168 aa6.1□□□□□ -1.43
YRF1-1YDR545W DAP1Q12091 152 aa6.1□□□□□ -1.43
YRF1-1YDR545W UBC5P15732 148 aa6.1□□□□□ -1.43
YRF1-1YDR545W RRT13P40042 185 aa6.1□□□□□ -1.43
YRF1-1YDR545W YHL018WP38744 120 aaPredicted RBP6.09□□□□□ -1.43
YRF1-1YDR545W YMR105W-AQ8TGS8 64 aa6.09□□□□□ -1.43
YRF1-1YDR545W RPS26AP39938 119 aaKnown RBP6.08□□□□□ -1.44
YRF1-1YDR545W YLR285C-AQ3E771 56 aa6.08□□□□□ -1.44
YRF1-1YDR545W RPL11AP0C0W9 174 aaKnown RBP6.08□□□□□ -1.44
YRF1-1YDR545W BNA1P47096 177 aa6.08□□□□□ -1.44
YRF1-1YDR545W SGN1P40561 250 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
YRF1-1YDR545W IMP2P46972 177 aa6.07□□□□□ -1.44
YRF1-1YDR545W TSC3Q3E790 80 aa6.07□□□□□ -1.44
YRF1-1YDR545W YOL160WQ08321 113 aa6.07□□□□□ -1.44
YRF1-1YDR545W YPR053CQ6Q5F3 151 aa6.07□□□□□ -1.44
YRF1-1YDR545W SEC16P48415 2195 aaKnown RBP6.07□□□□□ -1.44
YRF1-1YDR545W YMR317WQ04893 1140 aa6.07□□□□□ -1.44
YRF1-1YDR545W CYR1P08678 2026 aaKnown RBP6.06□□□□□ -1.44
YRF1-1YDR545W ERG28P40030 148 aa6.06□□□□□ -1.44
YRF1-1YDR545W YGL088WP53151 121 aa6.06□□□□□ -1.44
YRF1-1YDR545W YNL194CP40169 301 aa6.06□□□□□ -1.44
YRF1-1YDR545W ACC1Q00955 2233 aaKnown RBP6.06□□□□□ -1.44
YRF1-1YDR545W NCE103P53615 221 aa6.05□□□□□ -1.44
YRF1-1YDR545W YIL046W-AQ3E7Z4 54 aa6.05□□□□□ -1.44
YRF1-1YDR545W YDR381C-AQ3E6R5 114 aa6.05□□□□□ -1.44
YRF1-1YDR545W YDL022C-AP0C5L6 82 aa6.05□□□□□ -1.44
YRF1-1YDR545W IES6P32617 166 aa6.05□□□□□ -1.44
YRF1-1YDR545W YFL015CP43578 164 aa6.04□□□□□ -1.44
YRF1-1YDR545W RPS28BP0C0X0 67 aaKnown RBP6.04□□□□□ -1.44
YRF1-1YDR545W RPS28AQ3E7X9 67 aaPredicted RBP6.04□□□□□ -1.44
YRF1-1YDR545W CTR2P38865 189 aa6.04□□□□□ -1.44
YRF1-1YDR545W AIM4P38305 123 aaPredicted RBP6.03□□□□□ -1.44
YRF1-1YDR545W YER187WP40102 141 aa6.03□□□□□ -1.44
YRF1-1YDR545W YHR022CP38763 256 aa6.03□□□□□ -1.44
YRF1-1YDR545W YJR146WP47174 117 aa6.03□□□□□ -1.44
YRF1-1YDR545W FAS1P07149 2051 aaKnown RBP6.03□□□□□ -1.44
YRF1-1YDR545W TDA2P40045 126 aa6.03□□□□□ -1.44
YRF1-1YDR545W YJL027CP47063 138 aaPredicted RBP6.03□□□□□ -1.44
YRF1-1YDR545W YOR020W-AQ3E824 90 aa6.03□□□□□ -1.44
YRF1-1YDR545W RPL11BQ3E757 174 aaPredicted RBP6.03□□□□□ -1.44
YRF1-1YDR545W YOR029WQ12243 111 aa6.02□□□□□ -1.45
YRF1-1YDR545W RPL16AP26784 199 aaKnown RBP6.02□□□□□ -1.45
YRF1-1YDR545W SVP26P38869 228 aa6.02□□□□□ -1.45
YRF1-1YDR545W PMP3P87284 55 aa6.02□□□□□ -1.45
YRF1-1YDR545W YLR281CQ05863 155 aa6.02□□□□□ -1.45
YRF1-1YDR545W YKL183C-AQ3E765 70 aa6.02□□□□□ -1.45
YRF1-1YDR545W YJR107C-AP0CT86 78 aa6.02□□□□□ -1.45
YRF1-1YDR545W RPL38P49167 78 aaKnown RBP6.02□□□□□ -1.45
YRF1-1YDR545W PBP4Q07362 185 aaKnown RBP6.02□□□□□ -1.45
YRF1-1YDR545W YOR011W-AQ3E807 68 aa6.02□□□□□ -1.45
YRF1-1YDR545W IRC21Q04772 201 aa6.01□□□□□ -1.45
YRF1-1YDR545W NRM1P53718 249 aa6.01□□□□□ -1.45
YRF1-1YDR545W BRR2P32639 2163 aaKnown RBP6□□□□□ -1.45
YRF1-1YDR545W YMR320WQ04897 101 aa6□□□□□ -1.45
YRF1-1YDR545W YNL046WP53956 172 aa6□□□□□ -1.45
YRF1-1YDR545W YBR200W-AQ3E755 54 aa6□□□□□ -1.45
YRF1-1YDR545W YKR045CP36138 183 aa5.99□□□□□ -1.45
YRF1-1YDR545W SED1Q01589 338 aa5.99□□□□□ -1.45
YRF1-1YDR545W COX17Q12287 69 aa5.99□□□□□ -1.45
YRF1-1YDR545W YML122CQ03207 126 aa5.98□□□□□ -1.45
YRF1-1YDR545W UTH1P36135 365 aa5.98□□□□□ -1.45
YRF1-1YDR545W YOL085CQ99345 113 aa5.98□□□□□ -1.45
YRF1-1YDR545W SUT1P53032 299 aaKnown RBP5.98□□□□□ -1.45
YRF1-1YDR545W RTG1P32607 177 aa5.97□□□□□ -1.45
YRF1-1YDR545W MRPS12P53732 153 aa5.97□□□□□ -1.45
YRF1-1YDR545W ATP20Q12233 115 aa5.97□□□□□ -1.45
YRF1-1YDR545W RGM1Q00453 211 aa5.97□□□□□ -1.45
YRF1-1YDR545W HAL1Q01766 294 aa5.97□□□□□ -1.45
YRF1-1YDR545W MSA2P36157 363 aa5.96□□□□□ -1.45
YRF1-1YDR545W YCL048W-AQ2V2Q2 79 aa5.96□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms