RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W YPS5P53057 165 aa1.86□□□□□ -2.11
SNX41YDR425W ABF2Q02486 183 aa1.86□□□□□ -2.11
SNX41YDR425W COF1Q03048 143 aaKnown RBP1.86□□□□□ -2.11
SNX41YDR425W YDR114CQ04597 100 aa1.86□□□□□ -2.11
SNX41YDR425W YDR029WQ12111 104 aa1.86□□□□□ -2.11
SNX41YDR425W COA3Q3E7B2 85 aa1.86□□□□□ -2.11
SNX41YDR425W YHR139C-AO13536 103 aa1.85□□□□□ -2.11
SNX41YDR425W PFY1P07274 126 aa1.85□□□□□ -2.11
SNX41YDR425W UBC5P15732 148 aa1.85□□□□□ -2.11
SNX41YDR425W SMP1P38128 452 aa1.85□□□□□ -2.11
SNX41YDR425W YNL217WP40152 326 aa1.85□□□□□ -2.11
SNX41YDR425W CAX4P53223 239 aa1.85□□□□□ -2.11
SNX41YDR425W SWS2P53937 143 aa1.85□□□□□ -2.11
SNX41YDR425W COX12Q01519 83 aa1.85□□□□□ -2.11
SNX41YDR425W MGR2Q02889 113 aa1.85□□□□□ -2.11
SNX41YDR425W GPI19Q04082 140 aa1.85□□□□□ -2.11
SNX41YDR425W IGO2Q9P305 131 aa1.85□□□□□ -2.11
SNX41YDR425W RPS14AP06367 137 aaKnown RBP1.84□□□□□ -2.11
SNX41YDR425W IES6P32617 166 aa1.84□□□□□ -2.11
SNX41YDR425W YBL071CP38185 102 aa1.84□□□□□ -2.11
SNX41YDR425W RPS14BP39516 138 aaKnown RBP1.84□□□□□ -2.11
SNX41YDR425W YIL086CP40503 102 aa1.84□□□□□ -2.11
SNX41YDR425W AIM11P87275 137 aa1.84□□□□□ -2.11
SNX41YDR425W SDC1Q03323 175 aa1.84□□□□□ -2.11
SNX41YDR425W AIM34Q03673 198 aa1.84□□□□□ -2.11
SNX41YDR425W RRS1Q08746 203 aaKnown RBP1.84□□□□□ -2.11
SNX41YDR425W PRM7Q12459 698 aa1.84□□□□□ -2.11
SNX41YDR425W RPS28BP0C0X0 67 aaKnown RBP1.84□□□□□ -2.12
SNX41YDR425W YBR121C-AP0C5L4 52 aa1.84□□□□□ -2.12
SNX41YDR425W YHR213WP0CI67 198 aa1.84□□□□□ -2.12
SNX41YDR425W INO2P26798 304 aa1.84□□□□□ -2.12
SNX41YDR425W YHL042WP38729 150 aa1.84□□□□□ -2.12
SNX41YDR425W ERG28P40030 148 aa1.84□□□□□ -2.12
SNX41YDR425W GON7P46984 123 aa1.84□□□□□ -2.12
SNX41YDR425W YLR194CQ05777 254 aa1.84□□□□□ -2.12
SNX41YDR425W MRPL23Q12487 163 aaPredicted RBP1.84□□□□□ -2.12
SNX41YDR425W RPS28AQ3E7X9 67 aaPredicted RBP1.84□□□□□ -2.12
SNX41YDR425W PBI2P0CT04 75 aaKnown RBP1.83□□□□□ -2.12
SNX41YDR425W RPL2AP0CX45 254 aaKnown RBP1.83□□□□□ -2.12
SNX41YDR425W RPL2BP0CX46 254 aaKnown RBP1.83□□□□□ -2.12
SNX41YDR425W KTI12P34253 313 aaKnown RBP1.83□□□□□ -2.12
SNX41YDR425W GLE2P40066 365 aa1.83□□□□□ -2.12
SNX41YDR425W KEG1P43614 200 aa1.83□□□□□ -2.12
SNX41YDR425W TOS6P48560 102 aa1.83□□□□□ -2.12
SNX41YDR425W SBH1P52870 82 aa1.83□□□□□ -2.12
SNX41YDR425W YNL190WP53872 204 aa1.83□□□□□ -2.12
SNX41YDR425W YDR209CQ03480 137 aa1.83□□□□□ -2.12
SNX41YDR425W IRC23Q08416 157 aa1.83□□□□□ -2.12
SNX41YDR425W RNH203Q12338 110 aa1.83□□□□□ -2.12
SNX41YDR425W YPL038W-AQ3E7B4 63 aa1.83□□□□□ -2.12
SNX41YDR425W YIL046W-AQ3E7Z4 54 aa1.83□□□□□ -2.12
SNX41YDR425W YLR342W-AQ3E810 57 aa1.83□□□□□ -2.12
SNX41YDR425W RPL28P02406 149 aaKnown RBP1.82□□□□□ -2.12
SNX41YDR425W ATP15P21306 62 aa1.82□□□□□ -2.12
SNX41YDR425W YCR050CP25630 102 aa1.82□□□□□ -2.12
SNX41YDR425W YKR045CP36138 183 aa1.82□□□□□ -2.12
SNX41YDR425W SPI1P40092 148 aa1.82□□□□□ -2.12
SNX41YDR425W AIM19P40502 157 aa1.82□□□□□ -2.12
SNX41YDR425W PIR5P46999 287 aa1.82□□□□□ -2.12
SNX41YDR425W YDR381C-AQ3E6R5 114 aa1.82□□□□□ -2.12
SNX41YDR425W TOM1Q03280 3268 aa1.82□□□□□ -2.12
SNX41YDR425W TOM6P33448 61 aa1.82□□□□□ -2.12
SNX41YDR425W YHL018WP38744 120 aaPredicted RBP1.82□□□□□ -2.12
SNX41YDR425W YER084WP40057 128 aa1.82□□□□□ -2.12
SNX41YDR425W IGD1P43598 195 aa1.82□□□□□ -2.12
SNX41YDR425W IMP2P46972 177 aa1.82□□□□□ -2.12
SNX41YDR425W ALG13P53178 202 aa1.82□□□□□ -2.12
SNX41YDR425W MRPS12P53732 153 aa1.82□□□□□ -2.12
SNX41YDR425W YOR029WQ12243 111 aa1.82□□□□□ -2.12
SNX41YDR425W YOR008C-AQ3E7B9 74 aa1.82□□□□□ -2.12
SNX41YDR425W ADH5P38113 351 aaKnown RBP1.81□□□□□ -2.12
SNX41YDR425W RRT1P38192 103 aa1.81□□□□□ -2.12
SNX41YDR425W YLR042CQ07990 161 aa1.81□□□□□ -2.12
SNX41YDR425W RPL18AP0CX49 186 aaKnown RBP1.8□□□□□ -2.12
SNX41YDR425W RPL18BP0CX50 186 aaKnown RBP1.8□□□□□ -2.12
SNX41YDR425W YBR209WP38311 105 aa1.8□□□□□ -2.12
SNX41YDR425W SVP26P38869 228 aa1.8□□□□□ -2.12
SNX41YDR425W YJL027CP47063 138 aaPredicted RBP1.8□□□□□ -2.12
SNX41YDR425W SHH4Q06236 168 aa1.8□□□□□ -2.12
SNX41YDR425W YOL160WQ08321 113 aa1.8□□□□□ -2.12
SNX41YDR425W EMC6Q12431 108 aa1.8□□□□□ -2.12
SNX41YDR425W YMR105W-AQ8TGS8 64 aa1.8□□□□□ -2.12
SNX41YDR425W CCW14O13547 238 aa1.8□□□□□ -2.12
SNX41YDR425W RPL39P04650 51 aa1.8□□□□□ -2.12
SNX41YDR425W YSY6P38374 65 aa1.8□□□□□ -2.12
SNX41YDR425W MPC2P38857 129 aa1.8□□□□□ -2.12
SNX41YDR425W RRT13P40042 185 aa1.8□□□□□ -2.12
SNX41YDR425W YER187WP40102 141 aa1.8□□□□□ -2.12
SNX41YDR425W YNL194CP40169 301 aa1.8□□□□□ -2.12
SNX41YDR425W HUR1P45820 110 aa1.8□□□□□ -2.12
SNX41YDR425W YGR025WP53216 100 aa1.8□□□□□ -2.12
SNX41YDR425W YMR320WQ04897 101 aa1.8□□□□□ -2.12
SNX41YDR425W YRA2P36036 203 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
SNX41YDR425W MSA2P36157 363 aa1.79□□□□□ -2.12
SNX41YDR425W MRPL39P36533 70 aa1.79□□□□□ -2.12
SNX41YDR425W DCV1P43595 202 aa1.79□□□□□ -2.12
SNX41YDR425W YJR146WP47174 117 aa1.79□□□□□ -2.12
SNX41YDR425W SIP18P50263 79 aa1.79□□□□□ -2.12
SNX41YDR425W NRM1P53718 249 aa1.79□□□□□ -2.12
SNX41YDR425W KSH1Q8TGJ3 72 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms