RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C ABF2Q02486 183 aa2.41□□□□□ -2.02
CDC40YDR364C UPS3Q04006 179 aa2.41□□□□□ -2.02
CDC40YDR364C YPR013CQ12145 317 aa2.41□□□□□ -2.02
CDC40YDR364C RPS22BQ3E7Y3 130 aaKnown RBP2.41□□□□□ -2.02
CDC40YDR364C YOR011W-AQ3E807 68 aa2.41□□□□□ -2.02
CDC40YDR364C YOR020W-AQ3E824 90 aa2.41□□□□□ -2.02
CDC40YDR364C YGR035W-AQ45U48 73 aa2.41□□□□□ -2.02
CDC40YDR364C TDA8Q6B2U8 126 aa2.41□□□□□ -2.02
CDC40YDR364C URA2P07259 2214 aaKnown RBP2.41□□□□□ -2.02
CDC40YDR364C SEC4P07560 215 aaKnown RBP2.4□□□□□ -2.02
CDC40YDR364C YEL045CP32616 141 aa2.4□□□□□ -2.02
CDC40YDR364C YKR041WP36134 250 aa2.4□□□□□ -2.02
CDC40YDR364C MRPL11P36521 249 aaPredicted RBP2.4□□□□□ -2.02
CDC40YDR364C YNL184CP53876 108 aa2.4□□□□□ -2.02
CDC40YDR364C HAL1Q01766 294 aa2.4□□□□□ -2.02
CDC40YDR364C SEN15Q04675 128 aa2.4□□□□□ -2.02
CDC40YDR364C YPR063CQ12160 140 aa2.4□□□□□ -2.02
CDC40YDR364C PRM7Q12459 698 aa2.4□□□□□ -2.02
CDC40YDR364C WIP1Q2V2P8 89 aa2.4□□□□□ -2.02
CDC40YDR364C YDL085C-AQ3E7B7 68 aaKnown RBP2.4□□□□□ -2.02
CDC40YDR364C YOL085CQ99345 113 aa2.4□□□□□ -2.02
CDC40YDR364C YHR212W-AP0CX91 67 aa2.39□□□□□ -2.03
CDC40YDR364C UTR5P32630 166 aa2.39□□□□□ -2.03
CDC40YDR364C YHR022CP38763 256 aa2.39□□□□□ -2.03
CDC40YDR364C SPI1P40092 148 aa2.39□□□□□ -2.03
CDC40YDR364C CUE4Q04201 117 aaPredicted RBP2.39□□□□□ -2.03
CDC40YDR364C GRH1Q04410 372 aaKnown RBP2.39□□□□□ -2.03
CDC40YDR364C FSF1Q12029 327 aaKnown RBP2.39□□□□□ -2.03
CDC40YDR364C YLR050CQ12155 161 aaKnown RBP2.39□□□□□ -2.03
CDC40YDR364C YNL146C-AQ3E7Z1 64 aa2.39□□□□□ -2.03
CDC40YDR364C COA6Q3E846 104 aa2.39□□□□□ -2.03
CDC40YDR364C YIL134C-AQ45U18 67 aa2.39□□□□□ -2.03
CDC40YDR364C TAR1Q8TGM6 124 aa2.39□□□□□ -2.03
CDC40YDR364C ADH1P00330 348 aaKnown RBP2.38□□□□□ -2.03
CDC40YDR364C GSP1P32835 219 aaKnown RBP2.38□□□□□ -2.03
CDC40YDR364C GSP2P32836 220 aaKnown RBP2.38□□□□□ -2.03
CDC40YDR364C YER134CP40081 178 aa2.38□□□□□ -2.03
CDC40YDR364C AGE2P40529 298 aa2.38□□□□□ -2.03
CDC40YDR364C LSM8P47093 109 aaKnown RBP2.38□□□□□ -2.03
CDC40YDR364C SMD1Q02260 146 aaPredicted RBP2.38□□□□□ -2.03
CDC40YDR364C MRPS8Q03799 155 aa2.38□□□□□ -2.03
CDC40YDR364C GPI19Q04082 140 aa2.38□□□□□ -2.03
CDC40YDR364C CCW12Q12127 133 aa2.38□□□□□ -2.03
CDC40YDR364C YKL102CP34249 101 aa2.37□□□□□ -2.03
CDC40YDR364C RPF1P38805 295 aaKnown RBP2.37□□□□□ -2.03
CDC40YDR364C YHR140WP38842 239 aa2.37□□□□□ -2.03
CDC40YDR364C MPC2P38857 129 aa2.37□□□□□ -2.03
CDC40YDR364C YER135CP40082 130 aa2.37□□□□□ -2.03
CDC40YDR364C AIM34Q03673 198 aa2.37□□□□□ -2.03
CDC40YDR364C MBF1O14467 151 aaKnown RBP2.36□□□□□ -2.03
CDC40YDR364C YKR032WP36127 104 aa2.36□□□□□ -2.03
CDC40YDR364C YNL200CP40165 246 aaKnown RBP2.36□□□□□ -2.03
CDC40YDR364C YDR274CP87283 123 aa2.36□□□□□ -2.03
CDC40YDR364C SHH4Q06236 168 aa2.36□□□□□ -2.03
CDC40YDR364C VAR1P02381 398 aa2.36□□□□□ -2.03
CDC40YDR364C RPL2AP0CX45 254 aaKnown RBP2.36□□□□□ -2.03
CDC40YDR364C RPL2BP0CX46 254 aaKnown RBP2.36□□□□□ -2.03
CDC40YDR364C YCR023CP25351 611 aa2.36□□□□□ -2.03
CDC40YDR364C MIG1P27705 504 aa2.36□□□□□ -2.03
CDC40YDR364C PAU16P35994 123 aa2.36□□□□□ -2.03
CDC40YDR364C YFR035CP43608 114 aa2.36□□□□□ -2.03
CDC40YDR364C ERV14P53173 138 aa2.36□□□□□ -2.03
CDC40YDR364C BRP1P53194 125 aa2.36□□□□□ -2.03
CDC40YDR364C YDR366CP87287 132 aa2.36□□□□□ -2.03
CDC40YDR364C TVP18Q04767 167 aa2.36□□□□□ -2.03
CDC40YDR364C CNL1Q06333 122 aa2.36□□□□□ -2.03
CDC40YDR364C YBR200W-AQ3E755 54 aa2.36□□□□□ -2.03
CDC40YDR364C YPR014CQ6B0W2 109 aa2.36□□□□□ -2.03
CDC40YDR364C YFR032C-BQ8TGU2 87 aa2.36□□□□□ -2.03
CDC40YDR364C Q0255P03881 472 aa2.35□□□□□ -2.03
CDC40YDR364C RPS11AP0CX47 156 aaKnown RBP2.35□□□□□ -2.03
CDC40YDR364C RPS11BP0CX48 156 aaKnown RBP2.35□□□□□ -2.03
CDC40YDR364C FUN14P18411 198 aa2.35□□□□□ -2.03
CDC40YDR364C POP3P53833 195 aaPredicted RBP2.35□□□□□ -2.03
CDC40YDR364C YIL014C-AQ02598 104 aa2.35□□□□□ -2.03
CDC40YDR364C YLR042CQ07990 161 aa2.35□□□□□ -2.03
CDC40YDR364C PFY1P07274 126 aa2.34□□□□□ -2.04
CDC40YDR364C SCM4P32564 187 aa2.34□□□□□ -2.04
CDC40YDR364C POP7P38291 140 aa2.34□□□□□ -2.04
CDC40YDR364C FYV4P38783 130 aaPredicted RBP2.34□□□□□ -2.04
CDC40YDR364C MGR2Q02889 113 aa2.34□□□□□ -2.04
CDC40YDR364C PKR1Q03880 122 aaKnown RBP2.34□□□□□ -2.04
CDC40YDR364C DGA1Q08650 418 aa2.34□□□□□ -2.04
CDC40YDR364C FYV7Q12247 151 aa2.34□□□□□ -2.04
CDC40YDR364C DYN1P36022 4092 aa2.34□□□□□ -2.04
CDC40YDR364C YLR156WP0CE96 114 aa2.33□□□□□ -2.04
CDC40YDR364C YLR159WP0CE97 114 aa2.33□□□□□ -2.04
CDC40YDR364C YLR161WP0CE98 114 aa2.33□□□□□ -2.04
CDC40YDR364C HMRA2P0CY13 119 aa2.33□□□□□ -2.04
CDC40YDR364C MRPL44P19956 98 aa2.33□□□□□ -2.04
CDC40YDR364C PRE1P22141 198 aaKnown RBP2.33□□□□□ -2.04
CDC40YDR364C YNL217WP40152 326 aa2.33□□□□□ -2.04
CDC40YDR364C DCV1P43595 202 aa2.33□□□□□ -2.04
CDC40YDR364C OST2P46964 130 aa2.33□□□□□ -2.04
CDC40YDR364C COX12Q01519 83 aa2.33□□□□□ -2.04
CDC40YDR364C VPS71Q03433 280 aa2.33□□□□□ -2.04
CDC40YDR364C YCR075W-AQ3E830 75 aa2.33□□□□□ -2.04
CDC40YDR364C BET1P22804 142 aa2.32□□□□□ -2.04
CDC40YDR364C YCR001WP25347 104 aa2.32□□□□□ -2.04
CDC40YDR364C YHR125WP38831 101 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms