RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	YDR209C	Q03480	137 aa		3.4	□□□□□ -1.86
UPC2	YDR213W	GPI19	Q04082	140 aa		3.4	□□□□□ -1.86
UPC2	YDR213W	YFL041W-A	Q3E817	63 aa		3.4	□□□□□ -1.86
UPC2	YDR213W	YIP3	P53633	176 aa		3.4	□□□□□ -1.87
UPC2	YDR213W	AIM11	P87275	137 aa		3.4	□□□□□ -1.87
UPC2	YDR213W	YBR126W-A	Q8TGU7	68 aa		3.4	□□□□□ -1.87
UPC2	YDR213W	YCL021W-A	Q96VH3	125 aa		3.4	□□□□□ -1.87
UPC2	YDR213W	YHR213W	P0CI67	198 aa		3.39	□□□□□ -1.87
UPC2	YDR213W	YCR085W	P25650	117 aa		3.39	□□□□□ -1.87
UPC2	YDR213W	KTI12	P34253	313 aa	Known RBP	3.39	□□□□□ -1.87
UPC2	YDR213W	SKI6	P46948	246 aa	Predicted RBP	3.39	□□□□□ -1.87
UPC2	YDR213W	LCB3	P47013	409 aa		3.39	□□□□□ -1.87
UPC2	YDR213W	MGR2	Q02889	113 aa		3.39	□□□□□ -1.87
UPC2	YDR213W	KRE1	P17260	313 aa		3.39	□□□□□ -1.87
UPC2	YDR213W	MRPL24	P36525	258 aa	Predicted RBP	3.39	□□□□□ -1.87
UPC2	YDR213W	GLE2	P40066	365 aa		3.39	□□□□□ -1.87
UPC2	YDR213W	GLO1	P50107	326 aa		3.39	□□□□□ -1.87
UPC2	YDR213W	FPR2	P32472	135 aa		3.38	□□□□□ -1.87
UPC2	YDR213W	SDH7	Q04401	133 aa		3.38	□□□□□ -1.87
UPC2	YDR213W	RPL18A	P0CX49	186 aa	Known RBP	3.38	□□□□□ -1.87
UPC2	YDR213W	RPL18B	P0CX50	186 aa	Known RBP	3.38	□□□□□ -1.87
UPC2	YDR213W	UBC11	P52492	156 aa		3.38	□□□□□ -1.87
UPC2	YDR213W	YLR194C	Q05777	254 aa		3.38	□□□□□ -1.87
UPC2	YDR213W	PBA1	Q05778	276 aa		3.38	□□□□□ -1.87
UPC2	YDR213W	YNL217W	P40152	326 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	IMP2	P46972	177 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	YNL234W	P53857	426 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	YPL278C	Q08990	100 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	YMR105W-A	Q8TGS8	64 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	YOL085C	Q99345	113 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	PFY1	P07274	126 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	YBR209W	P38311	105 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	CTR2	P38865	189 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	AIM19	P40502	157 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	YDL186W	P48568	277 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	SIP18	P50263	79 aa		3.37	□□□□□ -1.87
UPC2	YDR213W	ECM12	O13529	151 aa		3.36	□□□□□ -1.87
UPC2	YDR213W	SMP1	P38128	452 aa		3.36	□□□□□ -1.87
UPC2	YDR213W	YLR042C	Q07990	161 aa		3.36	□□□□□ -1.87
UPC2	YDR213W	YOR034C-A	Q3E735	80 aa		3.36	□□□□□ -1.87
UPC2	YDR213W	Q0255	P03881	472 aa		3.36	□□□□□ -1.87
UPC2	YDR213W	RPL15A	P05748	204 aa	Known RBP	3.36	□□□□□ -1.87
UPC2	YDR213W	RPS8A	P0CX39	200 aa	Known RBP	3.36	□□□□□ -1.87
UPC2	YDR213W	RPS8B	P0CX40	200 aa	Known RBP	3.36	□□□□□ -1.87
UPC2	YDR213W	RRT1	P38192	103 aa		3.36	□□□□□ -1.87
UPC2	YDR213W	YGL088W	P53151	121 aa		3.36	□□□□□ -1.87
UPC2	YDR213W	YOL160W	Q08321	113 aa		3.36	□□□□□ -1.87
UPC2	YDR213W	TEL1	P38110	2787 aa		3.36	□□□□□ -1.87
UPC2	YDR213W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
UPC2	YDR213W	ADH5	P38113	351 aa	Known RBP	3.35	□□□□□ -1.87
UPC2	YDR213W	YHL042W	P38729	150 aa		3.35	□□□□□ -1.87
UPC2	YDR213W	ERG28	P40030	148 aa		3.35	□□□□□ -1.87
UPC2	YDR213W	RPL42A	P0CX27	106 aa	Known RBP	3.35	□□□□□ -1.87
UPC2	YDR213W	RPL42B	P0CX28	106 aa	Known RBP	3.35	□□□□□ -1.87
UPC2	YDR213W	TOS6	P48560	102 aa		3.35	□□□□□ -1.87
UPC2	YDR213W	YOR008C-A	Q3E7B9	74 aa		3.35	□□□□□ -1.87
UPC2	YDR213W	TRP1	P00912	224 aa		3.35	□□□□□ -1.87
UPC2	YDR213W	RAD6	P06104	172 aa		3.35	□□□□□ -1.87
UPC2	YDR213W	RPL2A	P0CX45	254 aa	Known RBP	3.35	□□□□□ -1.87
UPC2	YDR213W	RPL2B	P0CX46	254 aa	Known RBP	3.35	□□□□□ -1.87
UPC2	YDR213W	UBC5	P15732	148 aa		3.35	□□□□□ -1.87
UPC2	YDR213W	MRPL39	P36533	70 aa		3.35	□□□□□ -1.87
UPC2	YDR213W	WWM1	P43582	211 aa	Known RBP	3.35	□□□□□ -1.87
UPC2	YDR213W	UTH1	P36135	365 aa		3.34	□□□□□ -1.87
UPC2	YDR213W	YHL018W	P38744	120 aa	Predicted RBP	3.34	□□□□□ -1.88
UPC2	YDR213W	YJL027C	P47063	138 aa	Predicted RBP	3.34	□□□□□ -1.88
UPC2	YDR213W	YLR342W-A	Q3E810	57 aa		3.34	□□□□□ -1.88
UPC2	YDR213W	STF1	P01098	86 aa		3.33	□□□□□ -1.88
UPC2	YDR213W	YNL194C	P40169	301 aa		3.33	□□□□□ -1.88
UPC2	YDR213W	YCR050C	P25630	102 aa		3.33	□□□□□ -1.88
UPC2	YDR213W	RPL16A	P26784	199 aa	Known RBP	3.33	□□□□□ -1.88
UPC2	YDR213W	SPI1	P40092	148 aa		3.33	□□□□□ -1.88
UPC2	YDR213W	SBH2	P52871	88 aa		3.33	□□□□□ -1.88
UPC2	YDR213W	KRE9	P39005	276 aa		3.32	□□□□□ -1.88
UPC2	YDR213W	PBP4	Q07362	185 aa	Known RBP	3.32	□□□□□ -1.88
UPC2	YDR213W	GAT3	Q07928	141 aa		3.32	□□□□□ -1.88
UPC2	YDR213W	MRPL23	Q12487	163 aa	Predicted RBP	3.32	□□□□□ -1.88
UPC2	YDR213W	YDR381C-A	Q3E6R5	114 aa		3.32	□□□□□ -1.88
UPC2	YDR213W	NRM1	P53718	249 aa		3.32	□□□□□ -1.88
UPC2	YDR213W	MRPS12	P53732	153 aa		3.32	□□□□□ -1.88
UPC2	YDR213W	COX12	Q01519	83 aa		3.32	□□□□□ -1.88
UPC2	YDR213W	YPL038W-A	Q3E7B4	63 aa		3.32	□□□□□ -1.88
UPC2	YDR213W	GCN1	P33892	2672 aa	Known RBP	3.32	□□□□□ -1.88
UPC2	YDR213W	RPL43A	P0CX25	92 aa	Known RBP	3.31	□□□□□ -1.88
UPC2	YDR213W	RPL43B	P0CX26	92 aa		3.31	□□□□□ -1.88
UPC2	YDR213W	RRT13	P40042	185 aa		3.31	□□□□□ -1.88
UPC2	YDR213W	DCV1	P43595	202 aa		3.31	□□□□□ -1.88
UPC2	YDR213W	HUR1	P45820	110 aa		3.31	□□□□□ -1.88
UPC2	YDR213W	YDL009C	Q12210	107 aa		3.31	□□□□□ -1.88
UPC2	YDR213W	MRPL38	P35996	138 aa	Predicted RBP	3.3	□□□□□ -1.88
UPC2	YDR213W	PPT2	Q12036	173 aa		3.3	□□□□□ -1.88
UPC2	YDR213W	LDB16	P25587	256 aa		3.3	□□□□□ -1.88
UPC2	YDR213W	YLR281C	Q05863	155 aa		3.3	□□□□□ -1.88
UPC2	YDR213W	EMC6	Q12431	108 aa		3.29	□□□□□ -1.88
UPC2	YDR213W	YLR285C-A	Q3E771	56 aa		3.29	□□□□□ -1.88
UPC2	YDR213W	IES6	P32617	166 aa		3.29	□□□□□ -1.88
UPC2	YDR213W	SBH1	P52870	82 aa		3.29	□□□□□ -1.88
UPC2	YDR213W	TOM6	P33448	61 aa		3.28	□□□□□ -1.88
UPC2	YDR213W	SIM1	P40472	476 aa		3.28	□□□□□ -1.88
UPC2	YDR213W	EDC1	P53080	175 aa	Predicted RBP	3.28	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms