RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C YHR022CP38763 256 aa3.23□□□□□ -1.89
BRE4YDL231C YMR103CQ04436 120 aa3.23□□□□□ -1.89
BRE4YDL231C SLO1Q3E784 85 aa3.23□□□□□ -1.89
BRE4YDL231C YFR035CP43608 114 aa3.23□□□□□ -1.89
BRE4YDL231C IZH3Q07959 543 aa3.23□□□□□ -1.89
BRE4YDL231C YLR042CQ07990 161 aa3.23□□□□□ -1.89
BRE4YDL231C UTP23Q12339 254 aaKnown RBP3.23□□□□□ -1.89
BRE4YDL231C YLR342W-AQ3E810 57 aa3.23□□□□□ -1.89
BRE4YDL231C ERS1P17261 260 aa3.22□□□□□ -1.89
BRE4YDL231C ATP15P21306 62 aa3.22□□□□□ -1.89
BRE4YDL231C MRP49P32388 137 aa3.22□□□□□ -1.89
BRE4YDL231C PAU16P35994 123 aa3.22□□□□□ -1.89
BRE4YDL231C PRY2P36110 329 aa3.22□□□□□ -1.89
BRE4YDL231C DGA1Q08650 418 aa3.22□□□□□ -1.89
BRE4YDL231C RPL28P02406 149 aaKnown RBP3.22□□□□□ -1.89
BRE4YDL231C CDC43P18898 376 aa3.22□□□□□ -1.89
BRE4YDL231C YDR366CP87287 132 aa3.22□□□□□ -1.89
BRE4YDL231C YIR021W-AQ3E739 70 aa3.22□□□□□ -1.89
BRE4YDL231C DCV1P43595 202 aa3.21□□□□□ -1.89
BRE4YDL231C YMR244WQ04018 355 aa3.21□□□□□ -1.89
BRE4YDL231C SEC11P15367 167 aa3.21□□□□□ -1.9
BRE4YDL231C YOR008C-AQ3E7B9 74 aa3.21□□□□□ -1.9
BRE4YDL231C YKR070WP36151 352 aaKnown RBP3.21□□□□□ -1.9
BRE4YDL231C RPL32P38061 130 aaKnown RBP3.21□□□□□ -1.9
BRE4YDL231C YPL162CQ12042 273 aa3.21□□□□□ -1.9
BRE4YDL231C YDL157CQ12082 118 aa3.21□□□□□ -1.9
BRE4YDL231C YPR063CQ12160 140 aa3.21□□□□□ -1.9
BRE4YDL231C YNL217WP40152 326 aa3.2□□□□□ -1.9
BRE4YDL231C RPL15AP05748 204 aaKnown RBP3.2□□□□□ -1.9
BRE4YDL231C RPL31AP0C2H8 113 aaKnown RBP3.2□□□□□ -1.9
BRE4YDL231C RPS11AP0CX47 156 aaKnown RBP3.2□□□□□ -1.9
BRE4YDL231C RPS11BP0CX48 156 aaKnown RBP3.2□□□□□ -1.9
BRE4YDL231C MRPL24P36525 258 aaPredicted RBP3.2□□□□□ -1.9
BRE4YDL231C SVP26P38869 228 aa3.2□□□□□ -1.9
BRE4YDL231C YPL073CP40323 161 aa3.2□□□□□ -1.9
BRE4YDL231C ELC1Q03071 99 aa3.2□□□□□ -1.9
BRE4YDL231C VPS71Q03433 280 aa3.2□□□□□ -1.9
BRE4YDL231C YPL257WQ08974 193 aa3.2□□□□□ -1.9
BRE4YDL231C AQY1P0CD91 305 aa3.2□□□□□ -1.9
BRE4YDL231C YGL230CP53074 147 aa3.2□□□□□ -1.9
BRE4YDL231C YBR200W-AQ3E755 54 aa3.2□□□□□ -1.9
BRE4YDL231C RPL42AP0CX27 106 aaKnown RBP3.19□□□□□ -1.9
BRE4YDL231C RPL42BP0CX28 106 aaKnown RBP3.19□□□□□ -1.9
BRE4YDL231C YDL085C-AQ3E7B7 68 aaKnown RBP3.19□□□□□ -1.9
BRE4YDL231C YPL229WQ99395 206 aa3.19□□□□□ -1.9
BRE4YDL231C MRPS8Q03799 155 aa3.18□□□□□ -1.9
BRE4YDL231C YLR363W-AQ3E747 85 aa3.18□□□□□ -1.9
BRE4YDL231C YNL146C-AQ3E7Z1 64 aa3.18□□□□□ -1.9
BRE4YDL231C YNL190WP53872 204 aa3.18□□□□□ -1.9
BRE4YDL231C YLR122CQ12312 125 aa3.18□□□□□ -1.9
BRE4YDL231C YCR075W-AQ3E830 75 aa3.18□□□□□ -1.9
BRE4YDL231C NRG2P38082 220 aa3.18□□□□□ -1.9
BRE4YDL231C RRT13P40042 185 aa3.18□□□□□ -1.9
BRE4YDL231C PMP3P87284 55 aa3.18□□□□□ -1.9
BRE4YDL231C RPL16AP26784 199 aaKnown RBP3.17□□□□□ -1.9
BRE4YDL231C URM1P40554 99 aaPredicted RBP3.17□□□□□ -1.9
BRE4YDL231C YBL112CQ3E7Y4 105 aa3.17□□□□□ -1.9
BRE4YDL231C PEX22P39718 180 aa3.17□□□□□ -1.9
BRE4YDL231C BRP1P53194 125 aa3.17□□□□□ -1.9
BRE4YDL231C YER175W-AQ8TGU4 54 aa3.17□□□□□ -1.9
BRE4YDL231C YML079WQ03629 201 aa3.17□□□□□ -1.9
BRE4YDL231C YLR415CO13578 112 aa3.16□□□□□ -1.9
BRE4YDL231C RPL2AP0CX45 254 aaKnown RBP3.16□□□□□ -1.9
BRE4YDL231C RPL2BP0CX46 254 aaKnown RBP3.16□□□□□ -1.9
BRE4YDL231C ARO2P28777 376 aaKnown RBP3.16□□□□□ -1.9
BRE4YDL231C YRA2P36036 203 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
BRE4YDL231C SCW10Q04951 389 aa3.16□□□□□ -1.9
BRE4YDL231C DFM1Q12743 341 aaKnown RBP3.16□□□□□ -1.9
BRE4YDL231C MPC2P38857 129 aa3.15□□□□□ -1.9
BRE4YDL231C YER145C-AA0A023PYF4 145 aa3.15□□□□□ -1.91
BRE4YDL231C UTR5P32630 166 aa3.15□□□□□ -1.91
BRE4YDL231C YPS5P53057 165 aa3.15□□□□□ -1.91
BRE4YDL231C BET5Q03630 159 aa3.15□□□□□ -1.91
BRE4YDL231C PAI3P01094 68 aa3.15□□□□□ -1.91
BRE4YDL231C AIM11P87275 137 aa3.15□□□□□ -1.91
BRE4YDL231C PFY1P07274 126 aa3.14□□□□□ -1.91
BRE4YDL231C YER039C-AP0CD97 72 aa3.14□□□□□ -1.91
BRE4YDL231C VTC1P40046 129 aaRIP-Chip data3.14□□□□□ -1.91not detected
BRE4YDL231C SMD1Q02260 146 aaPredicted RBP3.14□□□□□ -1.91
BRE4YDL231C IGO2Q9P305 131 aa3.14□□□□□ -1.91
BRE4YDL231C YKL102CP34249 101 aa3.14□□□□□ -1.91
BRE4YDL231C YDR274CP87283 123 aa3.14□□□□□ -1.91
BRE4YDL231C HAL1Q01766 294 aa3.14□□□□□ -1.91
BRE4YDL231C COF1Q03048 143 aaKnown RBP3.14□□□□□ -1.91
BRE4YDL231C YEL008WP40001 126 aa3.14□□□□□ -1.91
BRE4YDL231C YDR042CQ03205 200 aa3.14□□□□□ -1.91
BRE4YDL231C CCW12Q12127 133 aa3.14□□□□□ -1.91
BRE4YDL231C YDL022C-AP0C5L6 82 aa3.13□□□□□ -1.91
BRE4YDL231C PAU23Q07987 124 aa3.13□□□□□ -1.91
BRE4YDL231C YOR097CQ12274 175 aaPredicted RBP3.13□□□□□ -1.91
BRE4YDL231C PAU17Q12370 124 aa3.13□□□□□ -1.91
BRE4YDL231C ADH1P00330 348 aaKnown RBP3.13□□□□□ -1.91
BRE4YDL231C YER181CP40097 107 aa3.13□□□□□ -1.91
BRE4YDL231C ARC15P40518 154 aaRIP-Chip data3.13□□□□□ -1.91not detected
BRE4YDL231C COX12Q01519 83 aa3.13□□□□□ -1.91
BRE4YDL231C YLR194CQ05777 254 aa3.13□□□□□ -1.91
BRE4YDL231C COA3Q3E7B2 85 aa3.13□□□□□ -1.91
BRE4YDL231C RDS3Q06835 107 aaPredicted RBP3.12□□□□□ -1.91
BRE4YDL231C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
BRE4YDL231C SPT4P32914 102 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms