RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W YHR140WP38842 239 aa3.14□□□□□ -1.91
PTC1YDL006W CYT2Q00873 224 aa3.14□□□□□ -1.91
PTC1YDL006W GPI19Q04082 140 aa3.14□□□□□ -1.91
PTC1YDL006W VAR1P02381 398 aa3.13□□□□□ -1.91
PTC1YDL006W RPL2AP0CX45 254 aaKnown RBP3.13□□□□□ -1.91
PTC1YDL006W RPL2BP0CX46 254 aaKnown RBP3.13□□□□□ -1.91
PTC1YDL006W RPS11AP0CX47 156 aaKnown RBP3.13□□□□□ -1.91
PTC1YDL006W RPS11BP0CX48 156 aaKnown RBP3.13□□□□□ -1.91
PTC1YDL006W SSS1P35179 80 aa3.13□□□□□ -1.91
PTC1YDL006W SEC72P39742 193 aaKnown RBP3.13□□□□□ -1.91
PTC1YDL006W CMC2Q3E7A4 109 aa3.13□□□□□ -1.91
PTC1YDL006W SEC4P07560 215 aaKnown RBP3.12□□□□□ -1.91
PTC1YDL006W MRPL28P36527 147 aa3.12□□□□□ -1.91
PTC1YDL006W YBL081WP38180 368 aaKnown RBP3.12□□□□□ -1.91
PTC1YDL006W YDR366CP87287 132 aa3.12□□□□□ -1.91
PTC1YDL006W VPS71Q03433 280 aa3.12□□□□□ -1.91
PTC1YDL006W TVP18Q04767 167 aa3.12□□□□□ -1.91
PTC1YDL006W FSF1Q12029 327 aaKnown RBP3.12□□□□□ -1.91
PTC1YDL006W YBR200W-AQ3E755 54 aa3.12□□□□□ -1.91
PTC1YDL006W COX12Q01519 83 aa3.11□□□□□ -1.91
PTC1YDL006W CUE4Q04201 117 aaPredicted RBP3.11□□□□□ -1.91
PTC1YDL006W YCR075W-AQ3E830 75 aa3.11□□□□□ -1.91
PTC1YDL006W YJL144WP47009 104 aa3.1□□□□□ -1.91
PTC1YDL006W OST3P48439 350 aa3.1□□□□□ -1.91
PTC1YDL006W BRP1P53194 125 aa3.1□□□□□ -1.91
PTC1YDL006W AIM34Q03673 198 aa3.1□□□□□ -1.91
PTC1YDL006W ISD11Q6Q560 94 aa3.1□□□□□ -1.91
PTC1YDL006W MRPL11P36521 249 aaPredicted RBP3.09□□□□□ -1.91
PTC1YDL006W YER134CP40081 178 aa3.09□□□□□ -1.91
PTC1YDL006W YFR035CP43608 114 aa3.09□□□□□ -1.91
PTC1YDL006W COA6Q3E846 104 aa3.09□□□□□ -1.91
PTC1YDL006W YCR001WP25347 104 aa3.08□□□□□ -1.92
PTC1YDL006W YKR032WP36127 104 aa3.08□□□□□ -1.92
PTC1YDL006W TEM1P38987 245 aa3.08□□□□□ -1.92
PTC1YDL006W YGL088WP53151 121 aa3.08□□□□□ -1.92
PTC1YDL006W CGR1P53188 120 aa3.08□□□□□ -1.92
PTC1YDL006W YLR042CQ07990 161 aa3.08□□□□□ -1.92
PTC1YDL006W YPR014CQ6B0W2 109 aa3.08□□□□□ -1.92
PTC1YDL006W HTL1Q9URQ5 78 aa3.08□□□□□ -1.92
PTC1YDL006W YCR023CP25351 611 aa3.07□□□□□ -1.92
PTC1YDL006W GSP1P32835 219 aaKnown RBP3.07□□□□□ -1.92
PTC1YDL006W GSP2P32836 220 aaKnown RBP3.07□□□□□ -1.92
PTC1YDL006W NRG2P38082 220 aa3.07□□□□□ -1.92
PTC1YDL006W YER076CP40049 302 aa3.07□□□□□ -1.92
PTC1YDL006W YNL200CP40165 246 aaKnown RBP3.07□□□□□ -1.92
PTC1YDL006W ERV14P53173 138 aa3.07□□□□□ -1.92
PTC1YDL006W SGF11Q03067 99 aa3.07□□□□□ -1.92
PTC1YDL006W SEN15Q04675 128 aa3.07□□□□□ -1.92
PTC1YDL006W YIL134C-AQ45U18 67 aa3.07□□□□□ -1.92
PTC1YDL006W PFY1P07274 126 aa3.06□□□□□ -1.92
PTC1YDL006W YNL217WP40152 326 aa3.06□□□□□ -1.92
PTC1YDL006W DCV1P43595 202 aa3.06□□□□□ -1.92
PTC1YDL006W PMP3P87284 55 aa3.06□□□□□ -1.92
PTC1YDL006W YIL014C-AQ02598 104 aa3.06□□□□□ -1.92
PTC1YDL006W VAM10Q08474 114 aa3.06□□□□□ -1.92
PTC1YDL006W YGR240C-AQ3E786 66 aa3.06□□□□□ -1.92
PTC1YDL006W DYN1P36022 4092 aa3.06□□□□□ -1.92
PTC1YDL006W YKR070WP36151 352 aaKnown RBP3.05□□□□□ -1.92
PTC1YDL006W POP3P53833 195 aaPredicted RBP3.05□□□□□ -1.92
PTC1YDL006W MGR2Q02889 113 aa3.05□□□□□ -1.92
PTC1YDL006W FCF1Q05498 189 aaPredicted RBP3.05□□□□□ -1.92
PTC1YDL006W CNL1Q06333 122 aa3.05□□□□□ -1.92
PTC1YDL006W RDS3Q06835 107 aaPredicted RBP3.05□□□□□ -1.92
PTC1YDL006W DGA1Q08650 418 aa3.05□□□□□ -1.92
PTC1YDL006W YBL112CQ3E7Y4 105 aa3.05□□□□□ -1.92
PTC1YDL006W PAU16P35994 123 aa3.04□□□□□ -1.92
PTC1YDL006W YRA2P36036 203 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
PTC1YDL006W YJL028WP47062 111 aa3.04□□□□□ -1.92
PTC1YDL006W LSM8P47093 109 aaKnown RBP3.04□□□□□ -1.92
PTC1YDL006W PKR1Q03880 122 aaKnown RBP3.04□□□□□ -1.92
PTC1YDL006W YOR008C-AQ3E7B9 74 aa3.04□□□□□ -1.92
PTC1YDL006W RPL27BP0C2H7 136 aaKnown RBP3.03□□□□□ -1.92
PTC1YDL006W KRE1P17260 313 aa3.03□□□□□ -1.92
PTC1YDL006W FUN14P18411 198 aa3.03□□□□□ -1.92
PTC1YDL006W PRE1P22141 198 aaKnown RBP3.03□□□□□ -1.92
PTC1YDL006W AUA1P32450 94 aa3.03□□□□□ -1.92
PTC1YDL006W APS1P35181 156 aa3.03□□□□□ -1.92
PTC1YDL006W YBR209WP38311 105 aa3.03□□□□□ -1.92
PTC1YDL006W TOS6P48560 102 aa3.03□□□□□ -1.92
PTC1YDL006W YLR050CQ12155 161 aaKnown RBP3.03□□□□□ -1.92
PTC1YDL006W MDN1Q12019 4910 aaKnown RBP3.02□□□□□ -1.93
PTC1YDL006W HMRA2P0CY13 119 aa3.02□□□□□ -1.93
PTC1YDL006W FYV4P38783 130 aaPredicted RBP3.02□□□□□ -1.93
PTC1YDL006W ERI1P62651 68 aaKnown RBP3.02□□□□□ -1.93
PTC1YDL006W YDR042CQ03205 200 aa3.02□□□□□ -1.93
PTC1YDL006W UBC5P15732 148 aa3.01□□□□□ -1.93
PTC1YDL006W MRP49P32388 137 aa3.01□□□□□ -1.93
PTC1YDL006W ARC15P40518 154 aaRIP-Chip data3.01□□□□□ -1.93not detected
PTC1YDL006W YJR146WP47174 117 aa3.01□□□□□ -1.93
PTC1YDL006W YMR103CQ04436 120 aa3.01□□□□□ -1.93
PTC1YDL006W FYV7Q12247 151 aa3.01□□□□□ -1.93
PTC1YDL006W MSL1P40567 111 aaPredicted RBP3□□□□□ -1.93
PTC1YDL006W SPC1P46965 94 aa3□□□□□ -1.93
PTC1YDL006W COA3Q3E7B2 85 aa3□□□□□ -1.93
PTC1YDL006W YMR122W-AQ3E842 84 aa3□□□□□ -1.93
PTC1YDL006W SCS22Q6Q595 175 aa3□□□□□ -1.93
PTC1YDL006W YPR010C-AA5Z2X5 72 aa2.99□□□□□ -1.93
PTC1YDL006W ATP5P09457 212 aa2.99□□□□□ -1.93
PTC1YDL006W SEC11P15367 167 aa2.99□□□□□ -1.93
PTC1YDL006W MRPL44P19956 98 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 132.7 ms