RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	RPL42A	P0CX27	106 aa	Known RBP	4.86	□□□□□ -1.63
RSA4	YCR072C	RPL42B	P0CX28	106 aa	Known RBP	4.86	□□□□□ -1.63
RSA4	YCR072C	VTC1	P40046	129 aa	RIP-Chip data	4.86	□□□□□ -1.63	not detected
RSA4	YCR072C	TVP23	P38962	199 aa		4.85	□□□□□ -1.63
RSA4	YCR072C	KEG1	P43614	200 aa		4.85	□□□□□ -1.63
RSA4	YCR072C	DAD4	P69851	72 aa		4.85	□□□□□ -1.63
RSA4	YCR072C	YDL009C	Q12210	107 aa		4.85	□□□□□ -1.63
RSA4	YCR072C	PFY1	P07274	126 aa		4.84	□□□□□ -1.63
RSA4	YCR072C	BET1	P22804	142 aa		4.84	□□□□□ -1.63
RSA4	YCR072C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
RSA4	YCR072C	YSY6	P38374	65 aa		4.84	□□□□□ -1.63
RSA4	YCR072C	MMS2	P53152	137 aa		4.84	□□□□□ -1.63
RSA4	YCR072C	COA3	Q3E7B2	85 aa		4.84	□□□□□ -1.63
RSA4	YCR072C	HMRA2	P0CY13	119 aa		4.83	□□□□□ -1.64
RSA4	YCR072C	YCR041W	P37265	110 aa		4.83	□□□□□ -1.64
RSA4	YCR072C	LYS1	P38998	373 aa	RIP-Chip data	4.83	□□□□□ -1.64	not detected
RSA4	YCR072C	YER187W	P40102	141 aa		4.83	□□□□□ -1.64
RSA4	YCR072C	HAL1	Q01766	294 aa		4.83	□□□□□ -1.64
RSA4	YCR072C	YLR194C	Q05777	254 aa		4.83	□□□□□ -1.64
RSA4	YCR072C	UBC4	P15731	148 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	AIM19	P40502	157 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	WWM1	P43582	211 aa	Known RBP	4.82	□□□□□ -1.64
RSA4	YCR072C	EAF6	P47128	113 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	ATP23	P53722	227 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	PBA1	Q05778	276 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	YLR281C	Q05863	155 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	RRS1	Q08746	203 aa	Known RBP	4.82	□□□□□ -1.64
RSA4	YCR072C	EMC6	Q12431	108 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	AGA1	P32323	725 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	YAR029W	P39549	74 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	TOS6	P48560	102 aa		4.82	□□□□□ -1.64
RSA4	YCR072C	RPL16B	P26785	198 aa	Known RBP	4.81	□□□□□ -1.64
RSA4	YCR072C	RSM19	P53733	91 aa	Predicted RBP	4.81	□□□□□ -1.64
RSA4	YCR072C	YAL064W-B	O13512	126 aa		4.8	□□□□□ -1.64
RSA4	YCR072C	LDB16	P25587	256 aa		4.8	□□□□□ -1.64
RSA4	YCR072C	SPT4	P32914	102 aa	Predicted RBP	4.8	□□□□□ -1.64
RSA4	YCR072C	YMR141C	P40211	102 aa		4.8	□□□□□ -1.64
RSA4	YCR072C	YIL029C	P40538	142 aa		4.8	□□□□□ -1.64
RSA4	YCR072C	TDA7	P53882	636 aa	Predicted RBP	4.8	□□□□□ -1.64
RSA4	YCR072C	HSK3	P69852	69 aa		4.8	□□□□□ -1.64
RSA4	YCR072C	CYR1	P08678	2026 aa	Known RBP	4.8	□□□□□ -1.64
RSA4	YCR072C	SPS100	P13130	326 aa		4.79	□□□□□ -1.64
RSA4	YCR072C	MPC2	P38857	129 aa		4.79	□□□□□ -1.64
RSA4	YCR072C	SPI1	P40092	148 aa		4.79	□□□□□ -1.64
RSA4	YCR072C	ECO1	P43605	281 aa		4.79	□□□□□ -1.64
RSA4	YCR072C	YNL046W	P53956	172 aa		4.79	□□□□□ -1.64
RSA4	YCR072C	RPL15B	P54780	204 aa	Predicted RBP	4.79	□□□□□ -1.64
RSA4	YCR072C	NIP7	Q08962	181 aa	Known RBP	4.79	□□□□□ -1.64
RSA4	YCR072C	HSP150	P32478	413 aa		4.78	□□□□□ -1.64
RSA4	YCR072C	YCR022C	P25620	114 aa		4.77	□□□□□ -1.65
RSA4	YCR072C	CTR2	P38865	189 aa		4.77	□□□□□ -1.65
RSA4	YCR072C	DCV1	P43595	202 aa		4.77	□□□□□ -1.65
RSA4	YCR072C	YPS5	P53057	165 aa		4.77	□□□□□ -1.65
RSA4	YCR072C	NRM1	P53718	249 aa		4.77	□□□□□ -1.65
RSA4	YCR072C	YMR181C	Q03231	154 aa		4.77	□□□□□ -1.65
RSA4	YCR072C	MTC6	P38849	526 aa		4.77	□□□□□ -1.65
RSA4	YCR072C	PEX22	P39718	180 aa		4.77	□□□□□ -1.65
RSA4	YCR072C	YGR018C	P53211	109 aa		4.77	□□□□□ -1.65
RSA4	YCR072C	YSF3	P0C074	85 aa	Predicted RBP	4.76	□□□□□ -1.65
RSA4	YCR072C	MSA2	P36157	363 aa		4.76	□□□□□ -1.65
RSA4	YCR072C	YFL019C	P43576	117 aa		4.76	□□□□□ -1.65
RSA4	YCR072C	YDR246W-A	Q3E763	66 aa		4.76	□□□□□ -1.65
RSA4	YCR072C	YLR342W-A	Q3E810	57 aa		4.76	□□□□□ -1.65
RSA4	YCR072C	CCW14	O13547	238 aa		4.75	□□□□□ -1.65
RSA4	YCR072C	YHR213W	P0CI67	198 aa		4.75	□□□□□ -1.65
RSA4	YCR072C	YBR209W	P38311	105 aa		4.75	□□□□□ -1.65
RSA4	YCR072C	PPT2	Q12036	173 aa		4.75	□□□□□ -1.65
RSA4	YCR072C	PRM7	Q12459	698 aa		4.75	□□□□□ -1.65
RSA4	YCR072C	TDA8	Q6B2U8	126 aa		4.75	□□□□□ -1.65
RSA4	YCR072C	YBL071C	P38185	102 aa		4.74	□□□□□ -1.65
RSA4	YCR072C	TOS8	P53147	276 aa		4.74	□□□□□ -1.65
RSA4	YCR072C	MRPS12	P53732	153 aa		4.74	□□□□□ -1.65
RSA4	YCR072C	YHR022C	P38763	256 aa		4.73	□□□□□ -1.65
RSA4	YCR072C	RPS14A	P06367	137 aa	Known RBP	4.72	□□□□□ -1.65
RSA4	YCR072C	AIM4	P38305	123 aa	Predicted RBP	4.72	□□□□□ -1.65
RSA4	YCR072C	HUR1	P45820	110 aa		4.72	□□□□□ -1.65
RSA4	YCR072C	YNL190W	P53872	204 aa		4.72	□□□□□ -1.65
RSA4	YCR072C	YOR008C-A	Q3E7B9	74 aa		4.72	□□□□□ -1.65
RSA4	YCR072C	RRT15	Q3E811	62 aa		4.72	□□□□□ -1.65
RSA4	YCR072C	YLR285C-A	Q3E771	56 aa		4.72	□□□□□ -1.65
RSA4	YCR072C	MIC10	Q96VH5	97 aa		4.72	□□□□□ -1.65
RSA4	YCR072C	ATP15	P21306	62 aa		4.71	□□□□□ -1.66
RSA4	YCR072C	RPS14B	P39516	138 aa	Known RBP	4.71	□□□□□ -1.66
RSA4	YCR072C	RPS27A	P35997	82 aa	Known RBP	4.7	□□□□□ -1.66
RSA4	YCR072C	RPS27B	P38711	82 aa		4.7	□□□□□ -1.66
RSA4	YCR072C	PEX17	P40155	199 aa		4.7	□□□□□ -1.66
RSA4	YCR072C	GAT4	P40569	121 aa		4.7	□□□□□ -1.66
RSA4	YCR072C	PIR5	P46999	287 aa		4.7	□□□□□ -1.66
RSA4	YCR072C	ICY1	Q04329	127 aa		4.7	□□□□□ -1.66
RSA4	YCR072C	MIG3	P39943	394 aa		4.69	□□□□□ -1.66
RSA4	YCR072C	YLR156W	P0CE96	114 aa		4.68	□□□□□ -1.66
RSA4	YCR072C	YLR159W	P0CE97	114 aa		4.68	□□□□□ -1.66
RSA4	YCR072C	YLR161W	P0CE98	114 aa		4.68	□□□□□ -1.66
RSA4	YCR072C	YHR214C-D	P0CX93	97 aa		4.68	□□□□□ -1.66
RSA4	YCR072C	MED6	P38782	295 aa		4.68	□□□□□ -1.66
RSA4	YCR072C	ERI1	P62651	68 aa	Known RBP	4.68	□□□□□ -1.66
RSA4	YCR072C	SHU1	P38751	150 aa		4.67	□□□□□ -1.66
RSA4	YCR072C	ATP20	Q12233	115 aa		4.67	□□□□□ -1.66
RSA4	YCR072C	RPL16A	P26784	199 aa	Known RBP	4.67	□□□□□ -1.66
RSA4	YCR072C	IMP2	P46972	177 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms