RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C RPL27BP0C2H7 136 aaKnown RBP5.4□□□□□ -1.54
RRP43YCR035C UBC5P15732 148 aa5.4□□□□□ -1.54
RRP43YCR035C YBR209WP38311 105 aa5.4□□□□□ -1.54
RRP43YCR035C CGR1P53188 120 aa5.4□□□□□ -1.54
RRP43YCR035C TPT1Q12272 230 aaKnown RBP5.4□□□□□ -1.54
RRP43YCR035C CRC1Q12289 327 aa5.4□□□□□ -1.54
RRP43YCR035C HMRA2P0CY13 119 aa5.39□□□□□ -1.55
RRP43YCR035C RPL16AP26784 199 aaKnown RBP5.39□□□□□ -1.55
RRP43YCR035C FYV4P38783 130 aaPredicted RBP5.39□□□□□ -1.55
RRP43YCR035C YGL088WP53151 121 aa5.39□□□□□ -1.55
RRP43YCR035C PKR1Q03880 122 aaKnown RBP5.39□□□□□ -1.55
RRP43YCR035C CNL1Q06333 122 aa5.39□□□□□ -1.55
RRP43YCR035C SCS22Q6Q595 175 aa5.39□□□□□ -1.55
RRP43YCR035C RPS8AP0CX39 200 aaKnown RBP5.38□□□□□ -1.55
RRP43YCR035C RPS8BP0CX40 200 aaKnown RBP5.38□□□□□ -1.55
RRP43YCR035C FUN14P18411 198 aa5.38□□□□□ -1.55
RRP43YCR035C APS1P35181 156 aa5.38□□□□□ -1.55
RRP43YCR035C AIM29P36154 155 aa5.38□□□□□ -1.55
RRP43YCR035C YIL059CP40520 121 aa5.38□□□□□ -1.55
RRP43YCR035C LSM8P47093 109 aaKnown RBP5.38□□□□□ -1.55
RRP43YCR035C YJR146WP47174 117 aa5.38□□□□□ -1.55
RRP43YCR035C YLR112WQ12130 139 aa5.38□□□□□ -1.55
RRP43YCR035C ADH2P00331 348 aaKnown RBP5.37□□□□□ -1.55
RRP43YCR035C HAC1P41546 238 aa5.37□□□□□ -1.55
RRP43YCR035C YMR103CQ04436 120 aa5.37□□□□□ -1.55
RRP43YCR035C TRP1P00912 224 aa5.36□□□□□ -1.55
RRP43YCR035C ARC15P40518 154 aaRIP-Chip data5.36□□□□□ -1.55not detected
RRP43YCR035C COA3Q3E7B2 85 aa5.36□□□□□ -1.55
RRP43YCR035C MRP49P32388 137 aa5.35□□□□□ -1.55
RRP43YCR035C YLR050CQ12155 161 aaKnown RBP5.35□□□□□ -1.55
RRP43YCR035C RPL31AP0C2H8 113 aaKnown RBP5.34□□□□□ -1.55
RRP43YCR035C SEC11P15367 167 aa5.34□□□□□ -1.55
RRP43YCR035C ERI1P62651 68 aaKnown RBP5.34□□□□□ -1.55
RRP43YCR035C YMR122W-AQ3E842 84 aa5.34□□□□□ -1.55
RRP43YCR035C YCL021W-AQ96VH3 125 aa5.34□□□□□ -1.55
RRP43YCR035C YEL008WP40001 126 aa5.33□□□□□ -1.56
RRP43YCR035C MSL1P40567 111 aaPredicted RBP5.33□□□□□ -1.56
RRP43YCR035C RPR2P40571 144 aa5.33□□□□□ -1.56
RRP43YCR035C SPC1P46965 94 aa5.33□□□□□ -1.56
RRP43YCR035C UBC11P52492 156 aa5.33□□□□□ -1.56
RRP43YCR035C YGL230CP53074 147 aa5.33□□□□□ -1.56
RRP43YCR035C ATP15P21306 62 aa5.32□□□□□ -1.56
RRP43YCR035C YKL070WP36087 169 aa5.32□□□□□ -1.56
RRP43YCR035C YER085CP40058 173 aa5.32□□□□□ -1.56
RRP43YCR035C NAT5Q08689 176 aa5.32□□□□□ -1.56
RRP43YCR035C MRPL44P19956 98 aa5.31□□□□□ -1.56
RRP43YCR035C BET5Q03630 159 aa5.31□□□□□ -1.56
RRP43YCR035C YPL261CQ08976 102 aa5.31□□□□□ -1.56
RRP43YCR035C YDL157CQ12082 118 aa5.31□□□□□ -1.56
RRP43YCR035C FYV7Q12247 151 aa5.31□□□□□ -1.56
RRP43YCR035C SCM4P32564 187 aa5.3□□□□□ -1.56
RRP43YCR035C RPL33AP05744 107 aaKnown RBP5.29□□□□□ -1.56
RRP43YCR035C ATP5P09457 212 aa5.29□□□□□ -1.56
RRP43YCR035C RPL33BP41056 107 aaKnown RBP5.29□□□□□ -1.56
RRP43YCR035C PBA1Q05778 276 aa5.29□□□□□ -1.56
RRP43YCR035C YCR007CP25354 239 aa5.28□□□□□ -1.56
RRP43YCR035C SVP26P38869 228 aa5.28□□□□□ -1.56
RRP43YCR035C AIM11P87275 137 aa5.28□□□□□ -1.56
RRP43YCR035C YMR320WQ04897 101 aa5.28□□□□□ -1.56
RRP43YCR035C YKL044WP36092 106 aa5.27□□□□□ -1.57
RRP43YCR035C RPL32P38061 130 aaKnown RBP5.27□□□□□ -1.57
RRP43YCR035C ERG28P40030 148 aa5.27□□□□□ -1.57
RRP43YCR035C DFM1Q12743 341 aaKnown RBP5.27□□□□□ -1.57
RRP43YCR035C YLL066W-BQ8TGJ7 56 aa5.27□□□□□ -1.57
RRP43YCR035C YPR010C-AA5Z2X5 72 aa5.26□□□□□ -1.57
RRP43YCR035C RTC6O14464 93 aa5.26□□□□□ -1.57
RRP43YCR035C YDL022C-AP0C5L6 82 aa5.26□□□□□ -1.57
RRP43YCR035C YBR219CP38317 127 aa5.26□□□□□ -1.57
RRP43YCR035C YPL073CP40323 161 aa5.26□□□□□ -1.57
RRP43YCR035C SAE3P89114 91 aa5.26□□□□□ -1.57
RRP43YCR035C YMR295CQ03559 197 aa5.26□□□□□ -1.57
RRP43YCR035C YKR041WP36134 250 aa5.25□□□□□ -1.57
RRP43YCR035C YLR194CQ05777 254 aa5.25□□□□□ -1.57
RRP43YCR035C YDL085C-AQ3E7B7 68 aaKnown RBP5.25□□□□□ -1.57
RRP43YCR035C ENV10Q99382 181 aa5.25□□□□□ -1.57
RRP43YCR035C SHU1P38751 150 aa5.24□□□□□ -1.57
RRP43YCR035C YAR029WP39549 74 aa5.24□□□□□ -1.57
RRP43YCR035C RRT15Q3E811 62 aa5.24□□□□□ -1.57
RRP43YCR035C RPF1P38805 295 aaKnown RBP5.23□□□□□ -1.57
RRP43YCR035C CIN5P40917 295 aa5.23□□□□□ -1.57
RRP43YCR035C YDR115WQ04598 105 aa5.23□□□□□ -1.57
RRP43YCR035C RPL18AP0CX49 186 aaKnown RBP5.22□□□□□ -1.57
RRP43YCR035C RPL18BP0CX50 186 aaKnown RBP5.22□□□□□ -1.57
RRP43YCR035C YEL067CP39978 195 aa5.22□□□□□ -1.57
RRP43YCR035C PEX17P40155 199 aa5.22□□□□□ -1.57
RRP43YCR035C YNR077CP53758 84 aa5.21□□□□□ -1.58
RRP43YCR035C PAU23Q07987 124 aa5.21□□□□□ -1.58
RRP43YCR035C PAU17Q12370 124 aa5.21□□□□□ -1.58
RRP43YCR035C IGO2Q9P305 131 aa5.21□□□□□ -1.58
RRP43YCR035C RPL28P02406 149 aaKnown RBP5.2□□□□□ -1.58
RRP43YCR035C YAL064WP39711 94 aa5.2□□□□□ -1.58
RRP43YCR035C RPC10P40422 70 aa5.2□□□□□ -1.58
RRP43YCR035C MRPS12P53732 153 aa5.2□□□□□ -1.58
RRP43YCR035C YMR175W-AQ3E766 64 aa5.2□□□□□ -1.58
RRP43YCR035C YBL081WP38180 368 aaKnown RBP5.19□□□□□ -1.58
RRP43YCR035C VTC1P40046 129 aaRIP-Chip data5.19□□□□□ -1.58not detected
RRP43YCR035C YFR057WP43625 151 aa5.19□□□□□ -1.58
RRP43YCR035C YPR195CQ06594 109 aa5.19□□□□□ -1.58
RRP43YCR035C LSO2Q3E772 92 aaKnown RBP5.19□□□□□ -1.58
RRP43YCR035C YAR023CD6VPM8 179 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms