RNA–Protein interactions for RNA: YBL056W

PTC3, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC3, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC3YBL056W POP3P53833 195 aaPredicted RBP4.54□□□□□ -1.68
PTC3YBL056W ARC15P40518 154 aaRIP-Chip data4.53□□□□□ -1.68not detected
PTC3YBL056W DPP1Q05521 289 aa4.53□□□□□ -1.68
PTC3YBL056W YMR122W-AQ3E842 84 aa4.53□□□□□ -1.68
PTC3YBL056W YIL134C-AQ45U18 67 aa4.53□□□□□ -1.68
PTC3YBL056W SPC1P46965 94 aa4.52□□□□□ -1.69
PTC3YBL056W ERV14P53173 138 aa4.52□□□□□ -1.69
PTC3YBL056W ERI1P62651 68 aaKnown RBP4.52□□□□□ -1.69
PTC3YBL056W YLR112WQ12130 139 aa4.52□□□□□ -1.69
PTC3YBL056W COA3Q3E7B2 85 aa4.52□□□□□ -1.69
PTC3YBL056W YOR008C-AQ3E7B9 74 aa4.52□□□□□ -1.69
PTC3YBL056W YLL066W-BQ8TGJ7 56 aa4.52□□□□□ -1.69
PTC3YBL056W HTL1Q9URQ5 78 aa4.52□□□□□ -1.69
PTC3YBL056W YLR415CO13578 112 aa4.51□□□□□ -1.69
PTC3YBL056W TRP1P00912 224 aa4.51□□□□□ -1.69
PTC3YBL056W HMRA2P0CY13 119 aa4.51□□□□□ -1.69
PTC3YBL056W PAU16P35994 123 aa4.51□□□□□ -1.69
PTC3YBL056W MRPL11P36521 249 aaPredicted RBP4.51□□□□□ -1.69
PTC3YBL056W YBR209WP38311 105 aa4.51□□□□□ -1.69
PTC3YBL056W YGL088WP53151 121 aa4.51□□□□□ -1.69
PTC3YBL056W COA6Q3E846 104 aa4.51□□□□□ -1.69
PTC3YBL056W RPL27BP0C2H7 136 aaKnown RBP4.5□□□□□ -1.69
PTC3YBL056W AIM29P36154 155 aa4.5□□□□□ -1.69
PTC3YBL056W YIL059CP40520 121 aa4.5□□□□□ -1.69
PTC3YBL056W ADH2P00331 348 aaKnown RBP4.49□□□□□ -1.69
PTC3YBL056W RPL33AP05744 107 aaKnown RBP4.49□□□□□ -1.69
PTC3YBL056W FYV4P38783 130 aaPredicted RBP4.49□□□□□ -1.69
PTC3YBL056W RPL33BP41056 107 aaKnown RBP4.49□□□□□ -1.69
PTC3YBL056W PKR1Q03880 122 aaKnown RBP4.49□□□□□ -1.69
PTC3YBL056W YEL008WP40001 126 aa4.48□□□□□ -1.69
PTC3YBL056W YMR103CQ04436 120 aa4.48□□□□□ -1.69
PTC3YBL056W PBA1Q05778 276 aa4.47□□□□□ -1.69
PTC3YBL056W CNL1Q06333 122 aa4.47□□□□□ -1.69
PTC3YBL056W TPT1Q12272 230 aaKnown RBP4.47□□□□□ -1.69
PTC3YBL056W APS1P35181 156 aa4.46□□□□□ -1.69
PTC3YBL056W YDR115WQ04598 105 aa4.46□□□□□ -1.69
PTC3YBL056W YLR050CQ12155 161 aaKnown RBP4.46□□□□□ -1.69
PTC3YBL056W YCL021W-AQ96VH3 125 aa4.46□□□□□ -1.69
PTC3YBL056W YPR010C-AA5Z2X5 72 aa4.46□□□□□ -1.7
PTC3YBL056W RTC6O14464 93 aa4.46□□□□□ -1.7
PTC3YBL056W RPL31AP0C2H8 113 aaKnown RBP4.46□□□□□ -1.7
PTC3YBL056W YKL070WP36087 169 aa4.46□□□□□ -1.7
PTC3YBL056W YBR219CP38317 127 aa4.46□□□□□ -1.7
PTC3YBL056W ERG28P40030 148 aa4.46□□□□□ -1.7
PTC3YBL056W YER085CP40058 173 aa4.46□□□□□ -1.7
PTC3YBL056W YMR320WQ04897 101 aa4.46□□□□□ -1.7
PTC3YBL056W SCS22Q6Q595 175 aa4.46□□□□□ -1.7
PTC3YBL056W SEC11P15367 167 aa4.45□□□□□ -1.7
PTC3YBL056W ATP15P21306 62 aa4.45□□□□□ -1.7
PTC3YBL056W HAC1P41546 238 aa4.44□□□□□ -1.7
PTC3YBL056W RRT15Q3E811 62 aa4.44□□□□□ -1.7
PTC3YBL056W YDL022C-AP0C5L6 82 aa4.43□□□□□ -1.7
PTC3YBL056W SVP26P38869 228 aa4.43□□□□□ -1.7
PTC3YBL056W YGL230CP53074 147 aa4.43□□□□□ -1.7
PTC3YBL056W YLR194CQ05777 254 aa4.43□□□□□ -1.7
PTC3YBL056W YPR195CQ06594 109 aa4.43□□□□□ -1.7
PTC3YBL056W YAR029WP39549 74 aa4.42□□□□□ -1.7
PTC3YBL056W AIM11P87275 137 aa4.42□□□□□ -1.7
PTC3YBL056W YMR295CQ03559 197 aa4.42□□□□□ -1.7
PTC3YBL056W BET5Q03630 159 aa4.42□□□□□ -1.7
PTC3YBL056W DFM1Q12743 341 aaKnown RBP4.42□□□□□ -1.7
PTC3YBL056W ENV10Q99382 181 aa4.42□□□□□ -1.7
PTC3YBL056W FUN14P18411 198 aa4.41□□□□□ -1.7
PTC3YBL056W RPC10P40422 70 aa4.41□□□□□ -1.7
PTC3YBL056W LSM8P47093 109 aaKnown RBP4.41□□□□□ -1.7
PTC3YBL056W YPL261CQ08976 102 aa4.41□□□□□ -1.7
PTC3YBL056W YDL157CQ12082 118 aa4.41□□□□□ -1.7
PTC3YBL056W MRPL44P19956 98 aa4.4□□□□□ -1.7
PTC3YBL056W YKL044WP36092 106 aa4.4□□□□□ -1.7
PTC3YBL056W YBL081WP38180 368 aaKnown RBP4.4□□□□□ -1.7
PTC3YBL056W MSL1P40567 111 aaPredicted RBP4.4□□□□□ -1.7
PTC3YBL056W FYV7Q12247 151 aa4.4□□□□□ -1.7
PTC3YBL056W NAT5Q08689 176 aa4.39□□□□□ -1.71
PTC3YBL056W YKR041WP36134 250 aa4.38□□□□□ -1.71
PTC3YBL056W RPL32P38061 130 aaKnown RBP4.38□□□□□ -1.71
PTC3YBL056W SHU1P38751 150 aa4.38□□□□□ -1.71
PTC3YBL056W YAL064WP39711 94 aa4.38□□□□□ -1.71
PTC3YBL056W YEL067CP39978 195 aa4.38□□□□□ -1.71
PTC3YBL056W CGR1P53188 120 aa4.38□□□□□ -1.71
PTC3YBL056W YAL065CO13511 128 aa4.38□□□□□ -1.71
PTC3YBL056W SCM4P32564 187 aa4.38□□□□□ -1.71
PTC3YBL056W YMR175W-AQ3E766 64 aa4.38□□□□□ -1.71
PTC3YBL056W YAR023CD6VPM8 179 aa4.37□□□□□ -1.71
PTC3YBL056W RPL18AP0CX49 186 aaKnown RBP4.37□□□□□ -1.71
PTC3YBL056W RPL18BP0CX50 186 aaKnown RBP4.37□□□□□ -1.71
PTC3YBL056W ANB1P19211 157 aa4.37□□□□□ -1.71
PTC3YBL056W YCR007CP25354 239 aa4.37□□□□□ -1.71
PTC3YBL056W COX14P39103 70 aa4.37□□□□□ -1.71
PTC3YBL056W PEX17P40155 199 aa4.37□□□□□ -1.71
PTC3YBL056W YPL073CP40323 161 aa4.36□□□□□ -1.71
PTC3YBL056W CIN5P40917 295 aa4.36□□□□□ -1.71
PTC3YBL056W UBC11P52492 156 aa4.36□□□□□ -1.71
PTC3YBL056W MRPS12P53732 153 aa4.36□□□□□ -1.71
PTC3YBL056W YNR077CP53758 84 aa4.36□□□□□ -1.71
PTC3YBL056W ATP5P09457 212 aa4.35□□□□□ -1.71
PTC3YBL056W VTC1P40046 129 aaRIP-Chip data4.35□□□□□ -1.71not detected
PTC3YBL056W TOA2P32774 122 aa4.34□□□□□ -1.71
PTC3YBL056W GAT4P40569 121 aa4.34□□□□□ -1.71
PTC3YBL056W YPL229WQ99395 206 aa4.34□□□□□ -1.71
PTC3YBL056W RPL28P02406 149 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms