RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 PDGFRBP09619 1106 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 TCF3P15923 654 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 BDNFP23560 247 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 HOXC13P31276 330 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 RAP1GAPP47736 663 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 PPP3CCP48454 512 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 TNNC1P63316 161 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 DMC1Q14565 340 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 ELF2Q15723 593 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 SNRNP35Q16560 246 aaKnown RBP11.17□□□□□ -0.62
FARP1-240ENST00000602263 MDH1BQ5I0G3 518 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 FAM26FQ5R3K3 315 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 SCARA3Q6AZY7 606 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 SYT13Q7L8C5 426 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 HS2ST1Q7LGA3 356 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 TRAPPC11Q7Z392 1133 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 KBTBD6Q86V97 674 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 IQUBQ8NA54 791 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 LINC00301Q8NCQ3 95 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 GLIS3Q8NEA6 775 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 MYCBPAPQ8TBZ2 947 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 HPS3Q969F9 1004 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 CNTNAP3BQ96NU0 1288 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 CNTNAP3Q9BZ76 1288 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 MAGEF1Q9HAY2 307 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 FBRSL1Q9HCM7 1045 aaKnown RBP11.17□□□□□ -0.62
FARP1-240ENST00000602263 CRTAC1Q9NQ79 661 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 AGPAT3Q9NRZ7 376 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 KBTBD4Q9NVX7 518 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 GCNT4Q9P109 453 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 CEP295Q9C0D2 2601 aa11.17□□□□□ -0.62
FARP1-240ENST00000602263 KMT2BQ9UMN6 2715 aaPredicted RBP11.16□□□□□ -0.62
FARP1-240ENST00000602263 RHOBTB1O94844 696 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 CLSTN1O94985 981 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 ABL1P00519 1130 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 ZNF806P0C7X5 589 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 LMO2P25791 158 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 GNL1P36915 607 aaPredicted RBP11.16□□□□□ -0.62
FARP1-240ENST00000602263 MPLP40238 635 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 CYP2J2P51589 502 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 LIMK1P53667 647 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 SNRPFP62306 86 aaKnown RBP11.16□□□□□ -0.62
FARP1-240ENST00000602263 TRPC3Q13507 836 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 SF3A2Q15428 464 aaKnown RBP11.16□□□□□ -0.62
FARP1-240ENST00000602263 CCDC6Q16204 474 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 E2F4Q16254 413 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 NAIF1Q69YI7 327 aaPredicted RBP11.16□□□□□ -0.62
FARP1-240ENST00000602263 LIMS2Q7Z4I7 341 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 C11orf74Q86VG3 221 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 XXYLT1Q8NBI6 393 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 RDH13Q8NBN7 331 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 TSTD1Q8NFU3 115 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 OR6B3Q8NGW1 331 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 ZNF507Q8TCN5 953 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 CCDC127Q96BQ5 260 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 PCED1BQ96HM7 432 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 ZC3H10Q96K80 434 aaKnown RBP11.16□□□□□ -0.62
FARP1-240ENST00000602263 SLITRK1Q96PX8 696 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 CGRRF1Q99675 332 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 MRPL45Q9BRJ2 306 aaKnown RBP11.16□□□□□ -0.62
FARP1-240ENST00000602263 ELOVL4Q9GZR5 314 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 VPS45Q9NRW7 570 aa11.16□□□□□ -0.62
FARP1-240ENST00000602263 ATP8B3O60423 1300 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 ZNF840PA6NDX5 716 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 F8VP50 259 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 K7ELQ4 463 aaPredicted RBP11.15□□□□□ -0.62
FARP1-240ENST00000602263 LEFTY2O00292 366 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 SLC9A3R1O14745 358 aaPredicted RBP11.15□□□□□ -0.62
FARP1-240ENST00000602263 CUTAO60888 179 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 PHACTR2O75167 634 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 TACC1O75410 805 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 YEATS4O95619 227 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 FAM163BP0C2L3 166 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 GBP1P32455 592 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 HOXD13P35453 343 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 DGKEP52429 567 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 USP46P62068 366 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 NOP14P78316 857 aaKnown RBP11.15□□□□□ -0.62
FARP1-240ENST00000602263 CYP24A1Q07973 514 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 PSMD6Q15008 389 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 WDR72Q3MJ13 1102 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 PLK5Q496M5 336 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 TDRD10Q5VZ19 366 aaKnown RBP11.15□□□□□ -0.62
FARP1-240ENST00000602263 CNNM4Q6P4Q7 775 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 UNC13DQ70J99 1090 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 EPM2AIP1Q7L775 607 aaPredicted RBP11.15□□□□□ -0.62
FARP1-240ENST00000602263 DDX42Q86XP3 938 aaKnown RBP eCLIP11.15□□□□□ -0.62
FARP1-240ENST00000602263 NELFCDQ8IXH7 590 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 KIAA1958Q8N8K9 716 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 C8orf48Q96LL4 319 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 C7orf25Q9BPX7 421 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 TTLL2Q9BWV7 592 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 POLR3BQ9NW08 1133 aaPredicted RBP11.15□□□□□ -0.62
FARP1-240ENST00000602263 CGNQ9P2M7 1197 aaKnown RBP11.15□□□□□ -0.62
FARP1-240ENST00000602263 EBF1Q9UH73 591 aa11.15□□□□□ -0.62
FARP1-240ENST00000602263 CEP192Q8TEP8 1941 aa11.14□□□□□ -0.63
FARP1-240ENST00000602263 PLXND1Q9Y4D7 1925 aa11.14□□□□□ -0.63
FARP1-240ENST00000602263 A8MXQ7 604 aa11.14□□□□□ -0.63
FARP1-240ENST00000602263 CLIC2O15247 247 aa11.14□□□□□ -0.63
FARP1-240ENST00000602263 TGFB1I1O43294 461 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms