RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TAS1R2Q8TE23 839 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 NKD2Q969F2 451 aaPredicted RBP11.19□□□□□ -0.62
CCDC9-203ENST00000596938 ZFYVE19Q96K21 471 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 CYP2S1Q96SQ9 504 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 IMPG2Q9BZV3 1241 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 ZNF518BQ9C0D4 1074 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 TMEM8AQ9HCN3 771 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 GTSE1Q9NYZ3 720 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 IL37Q9NZH6 218 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 TRPM5Q9NZQ8 1165 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 NDRG2Q9UN36 371 aaKnown RBP11.19□□□□□ -0.62
CCDC9-203ENST00000596938 SPECC1L-ADORA2AF8WAN1 911 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 CLDN5O00501 218 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 STX10O60499 249 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 TRIM49P0CI25 452 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 TRIM49CP0CI26 452 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 EPB41P11171 864 aaKnown RBP11.18□□□□□ -0.62
CCDC9-203ENST00000596938 CTHP32929 405 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 RAP1GAPP47736 663 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 NDST1P52848 882 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 CACNA2D1P54289 1103 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 FKBP3Q00688 224 aaKnown RBP11.18□□□□□ -0.62
CCDC9-203ENST00000596938 LRRC63Q05C16 580 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 TNK2Q07912 1038 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 INCA1Q0VD86 236 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 RUNX3Q13761 415 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 PDGFRLQ15198 375 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 KRT39Q6A163 491 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 ANKRD40Q6AI12 368 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 SPOPLQ6IQ16 392 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 CC2D1AQ6P1N0 951 aaPredicted RBP11.18□□□□□ -0.62
CCDC9-203ENST00000596938 SCARA5Q6ZMJ2 495 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 ACOT1Q86TX2 421 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 FUKQ8N0W3 1084 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 NUP93Q8N1F7 819 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 KIAA1958Q8N8K9 716 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 OVCA2Q8WZ82 227 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 ELMO3Q96BJ8 720 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 EEF2KMTQ96G04 330 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 SLC22A12Q96S37 553 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 KCNK16Q96T55 309 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 TSG101Q99816 390 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 CHRDQ9H2X0 955 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 CSNK1G1Q9HCP0 422 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 TRPC7Q9HCX4 862 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 TMEM30AQ9NV96 361 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 COMMD8Q9NX08 183 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 ARHGAP26Q9UNA1 814 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 WDR87Q6ZQQ6 2873 aa11.18□□□□□ -0.62
CCDC9-203ENST00000596938 C2orf78A6NCI8 922 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 PRR23AA6NEV1 266 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 TNFRSF10BO14763 440 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 SLC16A3O15427 465 aaKnown RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 KINO60870 393 aaKnown RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 CLSTN1O94985 981 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 RTN3O95197 1032 aaPredicted RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 CKMP06732 381 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 YWHAQP27348 245 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 PPP1R2P41236 205 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 SOX9P48436 509 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 AMPD2Q01433 879 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 TAF10Q12962 218 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 MTAPQ13126 283 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 LRRC32Q14392 662 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 DGKKQ5KSL6 1271 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 SNX30Q5VWJ9 437 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 ZC3H14Q6PJT7 736 aaKnown RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 TXNDC11Q6PKC3 985 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 ASCL5Q7RTU5 278 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 FAM35AQ86V20 835 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 SYNPOQ8N3V7 929 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 ARL14EPQ8N8R7 260 aaPredicted RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 CCDC150Q8NCX0 1101 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 FBXL13Q8NEE6 735 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 RIN3Q8TB24 985 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 NELL1Q92832 810 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 ERCC4Q92889 916 aaPredicted RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 SMARCD1Q96GM5 515 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 DHTKD1Q96HY7 919 aaPredicted RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 SLITRK1Q96PX8 696 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 MED10Q9BTT4 135 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 FAM126AQ9BYI3 521 aaPredicted RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 NIF3L1Q9GZT8 377 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 FAM124BQ9H5Z6 455 aaPredicted RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 APOBEC3GQ9HC16 384 aaKnown RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 DMAP1Q9NPF5 467 aaPredicted RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 HPS4Q9NQG7 708 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 PRMT8Q9NR22 394 aaPredicted RBP11.17□□□□□ -0.62
CCDC9-203ENST00000596938 RAB20Q9NX57 234 aa11.17□□□□□ -0.62
CCDC9-203ENST00000596938 FAM92AA1XBS5 289 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 OTOL1A6NHN0 477 aaPredicted RBP11.16□□□□□ -0.62
CCDC9-203ENST00000596938 GADD45BO75293 160 aaPredicted RBP11.16□□□□□ -0.62
CCDC9-203ENST00000596938 AP1G2O75843 785 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 OLFM2O95897 454 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 PMS1P54277 932 aaKnown RBP11.16□□□□□ -0.62
CCDC9-203ENST00000596938 SLC7A9P82251 487 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 CSTF1Q05048 431 aaKnown RBP11.16□□□□□ -0.62
CCDC9-203ENST00000596938 USP4Q13107 963 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 STIM1Q13586 685 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 187.9 ms