RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 TSPAN16Q9UKR8 245 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 LUC7L2Q9Y383 392 aaKnown RBP20.72■□□□□ 0.91
CIRBP-220ENST00000588917 ARIH1Q9Y4X5 557 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-220ENST00000588917 H3BQ06 376 aaPredicted RBP20.71■□□□□ 0.91
CIRBP-220ENST00000588917 THAP12O43422 761 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 IL9P15248 144 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 FERP16591 822 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 NPR3P17342 541 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 CDR1P51861 262 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 BCAT1P54687 386 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 SMAD4Q13485 552 aaKnown RBP20.71■□□□□ 0.91
CIRBP-220ENST00000588917 CYP4A22Q5TCH4 519 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 DNAJB7Q7Z6W7 309 aaPredicted RBP20.71■□□□□ 0.91
CIRBP-220ENST00000588917 ZNF677Q86XU0 584 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 VSTM4Q8IW00 320 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 TTC9BQ8N6N2 239 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 TFAP2BQ92481 460 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 MRFAP1L1Q96HT8 127 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 KRT82Q9NSB4 513 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 UXTQ9UBK9 157 aaPredicted RBP20.71■□□□□ 0.91
CIRBP-220ENST00000588917 CAPN11Q9UMQ6 739 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.71■□□□□ 0.91
CIRBP-220ENST00000588917 HCN4Q9Y3Q4 1203 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 MYO7AQ13402 2215 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 PLXNA3P51805 1871 aa20.71■□□□□ 0.91
CIRBP-220ENST00000588917 F8VP50 259 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 ZNF197O14709 1029 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 SOAT2O75908 522 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 GFPT2O94808 682 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 RTN3O95197 1032 aaPredicted RBP20.7■□□□□ 0.9
CIRBP-220ENST00000588917 SETSIPP0DME0 302 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 CYP11B1P15538 503 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 ATF6P18850 670 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 SSTR3P32745 418 aaPredicted RBP20.7■□□□□ 0.9
CIRBP-220ENST00000588917 PDE6CP51160 858 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 MAP3K7CLP57077 242 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 ZBED6P86452 979 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 BST2Q10589 180 aaKnown RBP20.7■□□□□ 0.9
CIRBP-220ENST00000588917 PTPN21Q16825 1174 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 GOLGA7BQ2TAP0 167 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 CLEC20AQ6ZU45 233 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 DENND5BQ6ZUT9 1274 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 NUP93Q8N1F7 819 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 GIPC2Q8TF65 315 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 KCNK16Q96T55 309 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 SMOQ99835 787 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 TTYH3Q9C0H2 523 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 PDCL3Q9H2J4 239 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 C11orf16Q9NQ32 467 aa20.7■□□□□ 0.9
CIRBP-220ENST00000588917 AVENQ9NQS1 362 aaPredicted RBP20.7■□□□□ 0.9
CIRBP-220ENST00000588917 MTCL1Q9Y4B5 1905 aaKnown RBP20.7■□□□□ 0.9
CIRBP-220ENST00000588917 SLC38A8A6NNN8 435 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 BRD2P25440 801 aaKnown RBP20.69■□□□□ 0.9
CIRBP-220ENST00000588917 ZNF75DP51815 510 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 PABPC1LQ4VXU2 614 aaKnown RBP20.69■□□□□ 0.9
CIRBP-220ENST00000588917 SFMBT2Q5VUG0 894 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 SLC47A2Q86VL8 602 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 CPLX3Q8WVH0 158 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 BAP1Q92560 729 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 SYN2Q92777 582 aaPredicted RBP20.69■□□□□ 0.9
CIRBP-220ENST00000588917 MYRFLQ96LU7 910 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 CORO1BQ9BR76 489 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 APOL5Q9BWW9 433 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 LHX5Q9H2C1 402 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 FBXO44Q9H4M3 255 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 WDR6Q9NNW5 1121 aaKnown RBP20.69■□□□□ 0.9
CIRBP-220ENST00000588917 ASAH2Q9NR71 780 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 AIPL1Q9NZN9 384 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 PCDHGC3Q9UN70 934 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 CEP83Q9Y592 693 aa20.69■□□□□ 0.9
CIRBP-220ENST00000588917 XPO1O14980 1071 aaKnown RBP20.68■□□□□ 0.9
CIRBP-220ENST00000588917 MBTPS2O43462 519 aa20.68■□□□□ 0.9
CIRBP-220ENST00000588917 MICAL2O94851 1124 aa20.68■□□□□ 0.9
CIRBP-220ENST00000588917 PPP3CCP48454 512 aa20.68■□□□□ 0.9
CIRBP-220ENST00000588917 SNX16P57768 344 aa20.68■□□□□ 0.9
CIRBP-220ENST00000588917 CLUL1Q15846 466 aa20.68■□□□□ 0.9
CIRBP-220ENST00000588917 TSR1Q2NL82 804 aaKnown RBP20.68■□□□□ 0.9
CIRBP-220ENST00000588917 GRASPQ7Z6J2 395 aaPredicted RBP20.68■□□□□ 0.9
CIRBP-220ENST00000588917 STK32AQ8WU08 396 aa20.68■□□□□ 0.9
CIRBP-220ENST00000588917 TRMT2BQ96GJ1 504 aaKnown RBP20.68■□□□□ 0.9
CIRBP-220ENST00000588917 DNMT3BQ9UBC3 853 aaKnown RBP20.68■□□□□ 0.9
CIRBP-220ENST00000588917 FAM86C2PA6NEL3 165 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 GOLGA6L3A6NEY3 463 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 M0QYV0 167 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 AP5Z1O43299 807 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 BEST1O76090 585 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 PNMA6AP0CW24 399 aaPredicted RBP20.67■□□□□ 0.9
CIRBP-220ENST00000588917 GPR15P49685 360 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 CACNA2D1P54289 1103 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 EPHA5P54756 1037 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 PDE4CQ08493 712 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 CBX2Q14781 532 aaPredicted RBP20.67■□□□□ 0.9
CIRBP-220ENST00000588917 PKDCCQ504Y2 493 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 PDZD4Q76G19 769 aaPredicted RBP20.67■□□□□ 0.9
CIRBP-220ENST00000588917 TTC30AQ86WT1 665 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 UBA3Q8TBC4 463 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 GPR152Q8TDT2 470 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 SUSD6Q92537 303 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 HSFY1Q96LI6 401 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 NOX5Q96PH1 765 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms