RNA–Protein interactions for RNA: ENST00000573001.5

TNFRSF12A-204, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3 BASIC

Gene TNFRSF12A, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-204ENST00000573001 PNKPQ96T60 521 aa13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PYM1Q9BRP8 204 aaKnown RBP13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 TIPINQ9BVW5 301 aa13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 RPF1Q9H9Y2 349 aaKnown RBP13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ABCB6Q9NP58 842 aa13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 TOR4AQ9NXH8 423 aa13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 LRWD1Q9UFC0 647 aa13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 KCNG1Q9UIX4 513 aa13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PCOLCE2Q9UKZ9 415 aa13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 DNM3Q9UQ16 869 aa13.39□□□□□ -0.27
TNFRSF12A-204ENST00000573001 IGHV1OR15-9A0A0B4J2B8 117 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 MYMKA6NI61 221 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ATXN7O15265 892 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 OGTO15294 1046 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 GABRG2P18507 467 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 HDCP19113 662 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 CYP2F1P24903 491 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 GRIA2P42262 883 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 TAF6P49848 677 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 SMTNP53814 917 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 RPL10AP62906 217 aaKnown RBP13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 CYP4F3Q08477 520 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PDIA5Q14554 519 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 KCNB1Q14721 858 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 DHCR24Q15392 516 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 NFE2Q16621 373 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 C12orf40Q86WS4 652 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PGBD3Q8N328 593 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 IGSF22Q8N9C0 903 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 BAHD1Q8TBE0 780 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PKMYT1Q99640 499 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ZDHHC4Q9NPG8 344 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 CALCOCO1Q9P1Z2 691 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 CPSF3Q9UKF6 684 aaKnown RBP13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 DERAQ9Y315 318 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 MYOFQ9NZM1 2061 aa13.38□□□□□ -0.27
TNFRSF12A-204ENST00000573001 A0A0B4J269 797 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 TRABD2BA6NFA1 517 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 LEFTY2O00292 366 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PIGRP01833 764 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 APODP05090 189 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 MATR3P43243 847 aaKnown RBP eCLIP13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 TNFRSF4P43489 277 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 TMEM132DQ14C87 1099 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 RHBDF2Q6PJF5 856 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 FILIP1Q7Z7B0 1213 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 TRIML1Q8N9V2 468 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 LSM14AQ8ND56 463 aaKnown RBP13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 NSUN7Q8NE18 718 aaKnown RBP13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 SNX29Q8TEQ0 813 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ZNF419Q96HQ0 510 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 HSPA12BQ96MM6 686 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 FAM124BQ9H5Z6 455 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 CD248Q9HCU0 757 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 RAI2Q9Y5P3 530 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ATMQ13315 3056 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 COL6A6A6NMZ7 2263 aa13.37□□□□□ -0.27
TNFRSF12A-204ENST00000573001 UNC79Q9P2D8 2635 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PFKLP17858 780 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 NCKAP1LP55160 1127 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 TSPY1Q01534 308 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 GRIK2Q13002 908 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PLEKHG6Q3KR16 790 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 MARCH9Q86YJ5 346 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 FSIP1Q8NA03 581 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 KCNV2Q8TDN2 545 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 BICD1Q96G01 975 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ZDHHC5Q9C0B5 715 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ARHGEF4Q9NR80 690 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 SUSD2Q9UGT4 822 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 HCN2Q9UL51 889 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 C2CD2Q9Y426 696 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PTPN13Q12923 2485 aa13.36□□□□□ -0.27
TNFRSF12A-204ENST00000573001 TCHHQ07283 1943 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 MYH11P35749 1972 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 A0A1W2PQF6 199 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 KPNA7A9QM74 516 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 HNRNPDLO14979 420 aaKnown RBP13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ZNF883P0CG24 379 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ABCG1P45844 678 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PDE6CP51160 858 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 FOSBP53539 338 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 SLC7A9P82251 487 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ATP2C1P98194 919 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 RAD51AP2Q09MP3 1159 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 RESTQ13127 1097 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 CFAP221Q4G0U5 840 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 LARP1BQ659C4 914 aaKnown RBP13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 SLC39A4Q6P5W5 647 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 DBX2Q6ZNG2 339 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ZNF605Q86T29 641 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ZNF843Q8N446 348 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 NECAB1Q8N987 351 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 FAM212AQ96EL1 285 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 MMTAG2Q9BU76 263 aaKnown RBP13.35□□□□□ -0.27
TNFRSF12A-204ENST00000573001 PRORYQ9H606 182 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms