RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CWC15Q9P013 229 aaKnown RBP19.04■□□□□ 0.64
SMPD3-211ENST00000568373 DNAH12Q6ZR08 3092 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 PDGFRAP16234 1089 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 PPP2R2AP63151 447 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 SKIDA1Q1XH10 827 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 P3H1Q32P28 736 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 HIBCHQ6NVY1 386 aaPredicted RBP19.03■□□□□ 0.64
SMPD3-211ENST00000568373 OLFML1Q6UWY5 402 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 TMEM110Q86TL2 294 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 FAM228AQ86W67 206 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 GLIS1Q8NBF1 620 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 KCTD6Q8NC69 237 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 UHMK1Q8TAS1 419 aaKnown RBP19.03■□□□□ 0.64
SMPD3-211ENST00000568373 KBTBD7Q8WVZ9 684 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 DDX23Q9BUQ8 820 aaKnown RBP19.03■□□□□ 0.64
SMPD3-211ENST00000568373 FRMD8P1Q9BZ68 369 aaPredicted RBP19.03■□□□□ 0.64
SMPD3-211ENST00000568373 DPEP3Q9H4B8 488 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 SLC12A6Q9UHW9 1150 aa19.03■□□□□ 0.64
SMPD3-211ENST00000568373 SCN10AQ9Y5Y9 1956 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 SPTLC1O15269 473 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 CST8O60676 142 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 CD48P09326 243 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 LSP1P33241 339 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 GJA9P57773 515 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 SOX4Q06945 474 aaPredicted RBP19.02■□□□□ 0.64
SMPD3-211ENST00000568373 GNASQ5JWF2 1037 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 C6orf118Q5T5N4 469 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 TWF2Q6IBS0 349 aaKnown RBP19.02■□□□□ 0.64
SMPD3-211ENST00000568373 SESTD1Q86VW0 696 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 TTC13Q8NBP0 860 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 STK32AQ8WU08 396 aa19.02■□□□□ 0.64
SMPD3-211ENST00000568373 MTG1Q9BT17 334 aaPredicted RBP19.02■□□□□ 0.64
SMPD3-211ENST00000568373 CYBAP13498 195 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 TAF6P49848 677 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 ARSEP51690 589 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 SNX16P57768 344 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 DYNLT1P63172 113 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 PLCB3Q01970 1234 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 PDE4CQ08493 712 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 TAF5Q15542 800 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 SH3PXD2AQ5TCZ1 1133 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 ARRDC4Q8NCT1 418 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 ACTL9Q8TC94 416 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 HSPH1Q92598 858 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 PEBP4Q96S96 227 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 ADAM7Q9H2U9 754 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 GOLGA2P5Q9HBQ8 144 aa19.02■□□□□ 0.63
SMPD3-211ENST00000568373 TLDC2A0PJX2 215 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 DNALI1O14645 258 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 GRAP2O75791 330 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 ACSL3O95573 720 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 TTC4O95801 387 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 ZSCAN5DPP0CG00 497 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 FGFR1P11362 822 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 GNL1P36915 607 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 MRPS6P82932 125 aaKnown RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 OTUD4Q01804 1114 aaKnown RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 C15orf59Q2T9L4 293 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 SV2CQ496J9 727 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 FOXR1Q6PIV2 292 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 CYP4V2Q6ZWL3 525 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 CRYBG2Q8N1P7 616 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 EPS8L3Q8TE67 593 aaKnown RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 TMEM121Q9BTD3 319 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 FOXP3Q9BZS1 431 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 DNAJC17Q9NVM6 304 aaKnown RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 GTF2IRD1Q9UHL9 959 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 SMIM23A6NLE4 172 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 DPYSL4O14531 572 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 RGS16O15492 202 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 HCRTO43612 131 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 PSMC4P43686 418 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 SLC6A3Q01959 620 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 LIMS2Q7Z4I7 341 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 ZDHHC17Q8IUH5 632 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 RELL1Q8IUW5 271 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 ZCCHC9Q8N567 271 aaKnown RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 APPL2Q8NEU8 664 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 BCAS4Q8TDM0 211 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 PWWP2AQ96N64 755 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 LPIN3Q9BQK8 851 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 ROPN1BQ9BZX4 212 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 ROPN1Q9HAT0 212 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 PCDH9Q9HC56 1237 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 SAE1Q9UBE0 346 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-211ENST00000568373 TLL2Q9Y6L7 1015 aa19.01■□□□□ 0.63
SMPD3-211ENST00000568373 M0QZ92 97 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 SGK1O00141 431 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 RASGRF2O14827 1237 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 PAPSS1O43252 624 aaPredicted RBP19■□□□□ 0.63
SMPD3-211ENST00000568373 CA12O43570 354 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 PDGFRBP09619 1106 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 ETS1P14921 441 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 LMO2P25791 158 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 FCGRTP55899 365 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 GPS1Q13098 491 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 CCDC14Q49A88 953 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 MFSD14CQ5VZR4 134 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 CXCL17Q6UXB2 119 aa19■□□□□ 0.63
SMPD3-211ENST00000568373 CEP128Q6ZU80 1094 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms