RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 PATJQ8NI35 1801 aa16.45■□□□□ 0.22
RABGGTA-219ENST00000560871 ATP8B3O60423 1300 aa16.45■□□□□ 0.22
RABGGTA-219ENST00000560871 FGF19O95750 216 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 SRFP11831 508 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 NPR3P17342 541 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 PON1P27169 355 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 USP46P62068 366 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 KRT31Q15323 416 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 NFKBIBQ15653 356 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 ZSCAN23Q3MJ62 389 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 STXBP5Q5T5C0 1151 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 PPP1R26Q5T8A7 1209 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 ARHGAP17Q68EM7 881 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 DPY19L2P1Q6NXN4 242 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 PARM1Q6UWI2 310 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 DENND5BQ6ZUT9 1274 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 RRAGAQ7L523 313 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 DHX40Q8IX18 779 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 TMEM105Q8N8V8 129 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 FGF14Q92915 247 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 MCRS1Q96EZ8 462 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 SMOQ99835 787 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 MED10Q9BTT4 135 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 RPP25Q9BUL9 199 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 TTLL2Q9BWV7 592 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 SIX2Q9NPC8 291 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 DMAP1Q9NPF5 467 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 APEX2Q9UBZ4 518 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 NUMBLQ9Y6R0 609 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 OBSL1O75147 1896 aa16.44■□□□□ 0.22
RABGGTA-219ENST00000560871 GREB1Q4ZG55 1949 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 TNFRSF10BO14763 440 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 AP1G2O75843 785 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 BEST1O76090 585 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 F11P03951 625 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 CFHP08603 1231 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 TRIM21P19474 475 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 FCARP24071 287 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 ANXA13P27216 316 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 ADORA2BP29275 332 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 CDC25CP30307 473 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 CLCN5P51795 746 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 ZNF132P52740 706 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 CYP4F8P98187 520 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 APBA1Q02410 837 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 KCNMA1Q12791 1236 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 TCF15Q12870 199 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 CWF19L1Q69YN2 538 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 GJB7Q6PEY0 223 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 CLEC20AQ6ZU45 233 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 APTXQ7Z2E3 356 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 ST13P5Q8NFI4 369 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 CYFIP2Q96F07 1278 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 ZSWIM3Q96MP5 696 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 KCNK16Q96T55 309 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 NAT10Q9H0A0 1025 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 MFSD1Q9H3U5 465 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 SLC2A4RGQ9NR83 387 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 AJAP1Q9UKB5 411 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 FBXL21Q9UKT6 434 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 MAGED2Q9UNF1 606 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 CNTN6Q9UQ52 1028 aa16.43■□□□□ 0.22
RABGGTA-219ENST00000560871 KRBA1A5PL33 1030 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 FAM200BP0CF97 657 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 ZNF165P49910 485 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 PTPN5P54829 565 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 TAF12Q16514 161 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 TMEM270Q6UE05 265 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 MTSS1LQ765P7 747 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 ENOSF1Q7L5Y1 443 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 SIX5Q8N196 739 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 JAKMIP2Q96AA8 810 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 ASB16Q96NS5 453 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 DNAI2Q9GZS0 605 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 ATXN3LQ9H3M9 355 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 UXTQ9UBK9 157 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 LIMA1Q9UHB6 759 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 NCANO14594 1321 aa16.42■□□□□ 0.22
RABGGTA-219ENST00000560871 HHLA1C9JL84 531 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 PAEPP09466 180 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 AOC1P19801 751 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 COPB1P53618 953 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 SLC5A3P53794 718 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 IQCB1Q15051 598 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 NUP93Q8N1F7 819 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 RBBP8NLQ8NC74 664 aaPredicted RBP16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 FLCNQ8NFG4 579 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 GCNAQ96QF7 691 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 GPR88Q9GZN0 384 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 VPS16Q9H269 839 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 PNPLA8Q9NP80 782 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 UBE2TQ9NPD8 197 aaPredicted RBP16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 IL37Q9NZH6 218 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 PCDHB4Q9Y5E5 795 aa16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 NUP210Q8TEM1 1887 aaPredicted RBP16.41■□□□□ 0.22
RABGGTA-219ENST00000560871 MUC6Q6W4X9 2439 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 FAM92AA1XBS5 289 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms