RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 TMEM150AQ86TG1 271 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 ZDHHC14Q8IZN3 488 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 SHKBP1Q8TBC3 707 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 ING5Q8WYH8 240 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 SHC3Q92529 594 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 ACSF2Q96CM8 615 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 TRMT2BQ96GJ1 504 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 ERGIC2Q96RQ1 377 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 DUSP16Q9BY84 665 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 GPR88Q9GZN0 384 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 DMAP1Q9NPF5 467 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 KRT82Q9NSB4 513 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 EPS15L1Q9UBC2 864 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 CDH7Q9ULB5 785 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 MAGED2Q9UNF1 606 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 FHOD1Q9Y613 1164 aa12.66□□□□□ -0.38
RABGGTA-218ENST00000560777 A0A1B0GTH6 734 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 A0A1W2PRU2 124 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 HHLA1C9JL84 531 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 GOLGA6L19H0YKK7 550 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 O00370 1275 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 FGF19O95750 216 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 KRT5P13647 590 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 NPR3P17342 541 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 CEBPBP17676 345 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 GABRR2P28476 465 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 TPM4P67936 248 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 DRAP1Q14919 205 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 NR1I3Q14994 352 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 TEAD2Q15562 447 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 CNGA2Q16280 664 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 SMYD5Q6GMV2 418 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 NPAS3Q8IXF0 933 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 NUP93Q8N1F7 819 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 TDRD5Q8NAT2 981 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 ANKRD52Q8NB46 1076 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 SCAMP5Q8TAC9 235 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 MCRS1Q96EZ8 462 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 ZSWIM3Q96MP5 696 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 STK33Q9BYT3 514 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 GANQ9H2C0 597 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 ATXN3LQ9H3M9 355 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 ACP6Q9NPH0 428 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 FAM207AQ9NSI2 230 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 IL37Q9NZH6 218 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 LIMD1Q9UGP4 676 aa12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 ZFP37Q9Y6Q3 630 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-218ENST00000560777 DOCK8Q8NF50 2099 aa12.65□□□□□ -0.39
RABGGTA-218ENST00000560777 EPHB6O15197 1021 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 SERPINC1P01008 464 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 BRD2P25440 801 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 CDC25CP30307 473 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 SSTR3P32745 418 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 USP8P40818 1118 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 FANCCQ00597 558 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 GOLGA7BQ2TAP0 167 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 FILIP1LQ4L180 1135 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 STXBP5Q5T5C0 1151 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 LCLAT1Q6UWP7 414 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 TTC30AQ86WT1 665 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 FAM71AQ8IYT1 594 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 UBA3Q8TBC4 463 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 TTLL2Q9BWV7 592 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 COL25A1Q9BXS0 654 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 GDE1Q9NZC3 331 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 UXTQ9UBK9 157 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 TSPAN16Q9UKR8 245 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 GREB1Q4ZG55 1949 aa12.64□□□□□ -0.39
RABGGTA-218ENST00000560777 CYP26A1O43174 497 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 TADA3O75528 432 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 RTN3O95197 1032 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 PNMA6AP0CW24 399 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 RFX1P22670 979 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 YWHAQP27348 245 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 CLCN1P35523 988 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 SLC5A3P53794 718 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 POLR2FP61218 127 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 CYP4F8P98187 520 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 PDE4CQ08493 712 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 TAF10Q12962 218 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 RAPGEF1Q13905 1077 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 PTPN21Q16825 1174 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 GPRIN1Q7Z2K8 1008 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 RNF135Q8IUD6 432 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 RNF214Q8ND24 703 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 ST13P5Q8NFI4 369 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 ZNF606Q8WXB4 792 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 PCMTD1Q96MG8 357 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 SLC46A2Q9BY10 475 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 PNPLA8Q9NP80 782 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 COMMD8Q9NX08 183 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 EHD2Q9NZN4 543 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 CHORDC1Q9UHD1 332 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 MYO10Q9HD67 2058 aa12.63□□□□□ -0.39
RABGGTA-218ENST00000560777 MYH10P35580 1976 aa12.62□□□□□ -0.39
RABGGTA-218ENST00000560777 FAM92AA1XBS5 289 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms