RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 RIN3Q8TB24 985 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 KBTBD7Q8WVZ9 684 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 USP13Q92995 863 aaPredicted RBP12.71□□□□□ -0.38
GABPB1-206ENST00000543881 ANKRD36BP1Q96IX9 119 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 P2RY13Q9BPV8 354 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 ZMYM5Q9UJ78 669 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-206ENST00000543881 CLIC2O15247 247 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 TADA3O75528 432 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 APBB3O95704 486 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 CST3P01034 146 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-206ENST00000543881 CEACAM1P13688 526 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 LMO2P25791 158 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 GBP1P32455 592 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 ME1P48163 572 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 MYL7Q01449 175 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 DNM1Q05193 864 aaKnown RBP12.7□□□□□ -0.38
GABPB1-206ENST00000543881 CUL4BQ13620 913 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 DMC1Q14565 340 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 DUOXA2Q1HG44 320 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 RESP18Q5W5W9 173 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 NAIF1Q69YI7 327 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-206ENST00000543881 SYT13Q7L8C5 426 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 GRAMD1CQ8IYS0 662 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 MAB21L3Q8N8X9 362 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 SCNM1Q9BWG6 230 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 GZF1Q9H116 711 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-206ENST00000543881 MAGEF1Q9HAY2 307 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 ABCB6Q9NP58 842 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 TDP1Q9NUW8 608 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 EBF1Q9UH73 591 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 MAGED2Q9UNF1 606 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-206ENST00000543881 OBSL1O75147 1896 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 ABCA7Q8IZY2 2146 aa12.7□□□□□ -0.38
GABPB1-206ENST00000543881 SRRM3A6NNA2 597 aaPredicted RBP12.69□□□□□ -0.38
GABPB1-206ENST00000543881 KHNYNO15037 678 aaKnown RBP12.69□□□□□ -0.38
GABPB1-206ENST00000543881 TNNC2P02585 160 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 HSP90AA1P07900 732 aaKnown RBP12.69□□□□□ -0.38
GABPB1-206ENST00000543881 CSH1P0DML2 217 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 CSH2P0DML3 217 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
GABPB1-206ENST00000543881 CSRP1P21291 193 aaKnown RBP12.69□□□□□ -0.38
GABPB1-206ENST00000543881 AFMP43652 599 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 LHX1P48742 406 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 DGKEP52429 567 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 SURF1Q15526 300 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 SNRNP35Q16560 246 aaKnown RBP12.69□□□□□ -0.38
GABPB1-206ENST00000543881 TXNDC8Q6A555 127 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 CC2D1AQ6P1N0 951 aaPredicted RBP12.69□□□□□ -0.38
GABPB1-206ENST00000543881 FAM171BQ6P995 826 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 DPH6Q7L8W6 267 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 WDR49Q8IV35 697 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 SPATA18Q8TC71 538 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 ZNF516Q92618 1163 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 GATA6Q92908 595 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 EXOC4Q96A65 974 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 KIF9Q9HAQ2 790 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 KIAA1586Q9HCI6 787 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 SLC39A2Q9NP94 309 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 TMEM9BQ9NQ34 198 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 RCOR1Q9UKL0 485 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 INVSQ9Y283 1065 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 NME7Q9Y5B8 376 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 IGF2RP11717 2491 aa12.69□□□□□ -0.38
GABPB1-206ENST00000543881 MYO16Q9Y6X6 1858 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 THADAQ6YHU6 1953 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 CDX4O14627 284 aaPredicted RBP12.68□□□□□ -0.38
GABPB1-206ENST00000543881 KLRC4O43908 158 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 NOL4O94818 638 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 DLATP10515 647 aaKnown RBP12.68□□□□□ -0.38
GABPB1-206ENST00000543881 PDIA4P13667 645 aaKnown RBP12.68□□□□□ -0.38
GABPB1-206ENST00000543881 DDX6P26196 483 aaKnown RBP eCLIP12.68□□□□□ -0.386e-6■■■■□ 19.3
GABPB1-206ENST00000543881 GJA4P35212 333 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 CYP2J2P51589 502 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
GABPB1-206ENST00000543881 RPL10AP62906 217 aaKnown RBP12.68□□□□□ -0.38
GABPB1-206ENST00000543881 CYP24A1Q07973 514 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 MYO1EQ12965 1108 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 PSMD2Q13200 908 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 PSMD6Q15008 389 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 PDGFRLQ15198 375 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 BMT2Q1RMZ1 405 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 CFAP221Q4G0U5 840 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 PMS2CLQ68D20 193 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 EZH1Q92800 747 aaPredicted RBP12.68□□□□□ -0.38
GABPB1-206ENST00000543881 ACDQ96AP0 544 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 MYRFLQ96LU7 910 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 CRTAC1Q9NQ79 661 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 FAM13BQ9NYF5 915 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 SERTAD1Q9UHV2 236 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 UBE4BO95155 1302 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 KIAA1549LQ6ZVL6 1849 aa12.68□□□□□ -0.38
GABPB1-206ENST00000543881 PVALEFA0A1B0GWK0 134 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 PATE3B3GLJ2 98 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 PDGFRBP09619 1106 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 PCSK1P29120 753 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 USP39Q53GS9 565 aaKnown RBP12.67□□□□□ -0.38
GABPB1-206ENST00000543881 ATL3Q6DD88 541 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms