RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TMEFF1Q8IYR6 380 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 ALLCQ8N6M5 410 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 LRRC52Q8N7C0 313 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 FRMD1Q8N878 549 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 CACTINQ8WUQ7 758 aaKnown RBP15□□□□□ -0.01
SMARCA4-206ENST00000538456 GATA6Q92908 595 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 FUBP3Q96I24 572 aaKnown RBP eCLIP15□□□□□ -0.01
SMARCA4-206ENST00000538456 MTMR12Q9C0I1 747 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 MRPL44Q9H9J2 332 aaKnown RBP15□□□□□ -0.01
SMARCA4-206ENST00000538456 ITGA11Q9UKX5 1188 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 CEP192Q8TEP8 1941 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 PCNX2A6NKB5 2137 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 MYO18AQ92614 2054 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 FASNP49327 2511 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 TMEM8BA6NDV4 472 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 SRRM3A6NNA2 597 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 HYAL3O43820 417 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 PPP1R37O75864 691 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 ALDH1A2O94788 518 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 KLF8O95600 359 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 TIE1P35590 1138 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 LONP1P36776 959 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 PTGER3P43115 390 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 LHX1P48742 406 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 USP46P62068 366 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 MESP2Q0VG99 397 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 LMAN2Q12907 356 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 SOWAHAQ2M3V2 549 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 LPCAT2Q7L5N7 544 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 TOP6BLQ8N6T0 577 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 TXNDC5Q8NBS9 432 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 OLIG1Q8TAK6 271 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 CXorf38Q8TB03 319 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 MYLPFQ96A32 169 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 HVCN1Q96D96 273 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 SPACA7Q96KW9 195 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 FNBP1Q96RU3 617 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 NUSAP1Q9BXS6 441 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 PDE11AQ9HCR9 933 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 ZDHHC4Q9NPG8 344 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 SMPD4Q9NXE4 827 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 GDAP2Q9NXN4 497 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 BCCIPQ9P287 314 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 SIX4Q9UIU6 781 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 EXOC7Q9UPT5 735 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 PLXND1Q9Y4D7 1925 aa14.99□□□□□ -0.01
SMARCA4-206ENST00000538456 ANKRD11Q6UB99 2663 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 SPAARA0A1B0GVQ0 90 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 SGK1O00141 431 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 GABRDO14764 452 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 GCNT3O95395 438 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 ABL1P00519 1130 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 TMEM191BP0C7N4 346 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 TCF3P15923 654 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 ENGP17813 658 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 BDNFP23560 247 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 GRIK1P39086 918 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 P2RY2P41231 377 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 MAGEA11P43364 429 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 SLC6A11P48066 632 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 PDE6CP51160 858 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 RBP5P82980 135 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 CYP27A1Q02318 531 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 KDSRQ06136 332 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 L1TD1Q5T7N2 865 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 LMBRD2Q68DH5 695 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 C4orf50Q6ZRC1 276 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 IL17RCQ8NAC3 791 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 SPATA18Q8TC71 538 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 WHAMMQ8TF30 809 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 HMGB4Q8WW32 186 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 ACCSQ96QU6 501 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 SYT15Q9BQS2 421 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 TMEM74BQ9NUR3 256 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 TRPM5Q9NZQ8 1165 aa14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 MAGEC2Q9UBF1 373 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 EVLQ9UI08 416 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-206ENST00000538456 FREM2Q5SZK8 3169 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 MYMKA6NI61 221 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 CFIP05156 583 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 LMO2P25791 158 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 ANXA13P27216 316 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 CASP5P51878 434 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 SIM1P81133 766 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 MRPS21P82921 87 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 RESTQ13127 1097 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 DHCR24Q15392 516 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 EMC10Q5UCC4 262 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 FAM171BQ6P995 826 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 DENND5BQ6ZUT9 1274 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 USP49Q70CQ1 688 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 C12orf40Q86WS4 652 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 SYT12Q8IV01 421 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 SYCP3Q8IZU3 236 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 PGBD3Q8N328 593 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 EPSTI1Q96J88 318 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 SPATA17Q96L03 361 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 CBWD1Q9BRT8 395 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 STRA6Q9BX79 667 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 RNF38Q9H0F5 515 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms