RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 TDP1Q9NUW8 608 aa18.29■□□□□ 0.52
SFSWAP-205ENST00000537164 RAB20Q9NX57 234 aa18.29■□□□□ 0.52
SFSWAP-205ENST00000537164 MYH10P35580 1976 aa18.29■□□□□ 0.52
SFSWAP-205ENST00000537164 ATP8B3O60423 1300 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 CLDN5O00501 218 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 MAN2B1O00754 1011 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 LRRN2O75325 713 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 PPP3CCP48454 512 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 USP46P62068 366 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 PLCB2Q00722 1185 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 ISM2Q6H9L7 571 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 ZNF852Q6ZMS4 543 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 FRMD5Q7Z6J6 570 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 ACOT1Q86TX2 421 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 FAM35AQ86V20 835 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 YAF2Q8IY57 180 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 FUKQ8N0W3 1084 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 TRIML1Q8N9V2 468 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 CCDC150Q8NCX0 1101 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 SEMA4DQ92854 862 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 SLC35C1Q96A29 364 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 CLDN23Q96B33 292 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 SMARCD1Q96GM5 515 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 MSANTD3Q96H12 275 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 DUSP9Q99956 384 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 METTL14Q9HCE5 456 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 CSNK1G1Q9HCP0 422 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 IL37Q9NZH6 218 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 GCNT4Q9P109 453 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 HMGXB4Q9UGU5 601 aa18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 ARMCX3Q9UH62 379 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-205ENST00000537164 CACNA1IQ9P0X4 2223 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 TNFRSF10BO14763 440 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 PMM2O15305 246 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 CILPO75339 1184 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 CLSTN1O94985 981 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 DCNP07585 359 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 TCF3P15923 654 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 MAGEA9P43362 315 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 RPS9P46781 194 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 FZD5Q13467 585 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 CBWD6Q4V339 395 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 CBWD3Q5JTY5 395 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 CBWD5Q5RIA9 395 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 C1orf228Q6PIY5 440 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 GPIHBP1Q8IV16 184 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 TTC39CQ8N584 583 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 WHAMMQ8TF30 809 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 MMRN2Q9H8L6 949 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 KIAA1468Q9P260 1216 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 CCL26Q9Y258 94 aa18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 MRPS17Q9Y2R5 130 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 MTF2Q9Y483 593 aaPredicted RBP18.27■□□□□ 0.52
SFSWAP-205ENST00000537164 BICDL2A1A5D9 508 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 FAM92AA1XBS5 289 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 FAM170BA6NMN3 283 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 H0Y858 1186 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 USP17L7P0C7H9 530 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 CD72P21854 359 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 TARSP26639 723 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 PDE6CP51160 858 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 NUP93Q8N1F7 819 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 OVCA2Q8WZ82 227 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 TWNKQ96RR1 684 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 SLC22A12Q96S37 553 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 KCNK16Q96T55 309 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 FAM83CQ9BQN1 747 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 NT5C1AQ9BXI3 368 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 SMG9Q9H0W8 520 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 C8orf33Q9H7E9 229 aaPredicted RBP18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 DMAP1Q9NPF5 467 aaPredicted RBP18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 THG1LQ9NWX6 298 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 COMMD8Q9NX08 183 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 TRPM5Q9NZQ8 1165 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 PIAS3Q9Y6X2 628 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 FRYLO94915 3013 aa18.26■□□□□ 0.51
SFSWAP-205ENST00000537164 TRAV19A0A0A6YYK7 116 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 C2orf78A6NCI8 922 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 ZNF840PA6NDX5 716 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 NCAM2O15394 837 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 RTN3O95197 1032 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 OLFM2O95897 454 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 TRIM21P19474 475 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 MARSP56192 900 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 UBXN2BQ14CS0 331 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 ANGPT1Q15389 498 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 DCAF17Q5H9S7 520 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 TCERG1LQ5VWI1 586 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 SNX30Q5VWJ9 437 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 C12orf29Q8N999 325 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 ZMIZ2Q8NF64 920 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 SLC2A14Q8TDB8 520 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 CSGALNACT1Q8TDX6 532 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 NELFBQ8WX92 580 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 HNRNPABQ99729 332 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 FANCMQ8IYD8 2048 aa18.25■□□□□ 0.51
SFSWAP-205ENST00000537164 ZFHX2Q9C0A1 2572 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 BIN1O00499 593 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 CCDC130P13994 396 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms