RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 A0A1B0GTW7 788 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 LACTBL1A8MY62 500 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 FLRT2O43155 660 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 RRP8O43159 456 aaKnown RBP14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 XPOTO43592 962 aaKnown RBP14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 ZNF217O75362 1048 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 PRPF40AO75400 957 aaKnown RBP14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 CLTAP09496 248 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 XBP1P17861 261 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 BNC1Q01954 994 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 KDSRQ06136 332 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 PPP2R3AQ06190 1150 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 MCL1Q07820 350 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 RESTQ13127 1097 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 DHCR24Q15392 516 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 SAFBQ15424 915 aaKnown RBP eCLIP14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 PTPRNQ16849 979 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 WDR45BQ5MNZ6 344 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 SPATA1Q5VX52 437 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 C9orf57Q5W0N0 161 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 THEM5Q8N1Q8 247 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 PHTF2Q8N3S3 785 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 FAM181AQ8N9Y4 354 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 NXPE2Q96DL1 559 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 ZNF274Q96GC6 653 aaPredicted RBP14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 HAPLN2Q9GZV7 340 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 KMT5AQ9NQR1 393 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 DSEQ9UL01 958 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 BTBD3Q9Y2F9 522 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 PCDHGB2Q9Y5G2 931 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 SCN1AP35498 2009 aa14.95□□□□□ -0.02
NKX3-1-202ENST00000523261 COL5A1P20908 1838 aaPredicted RBP14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 TEX15Q9BXT5 2789 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 A0A1W2PQF6 199 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 ERVH48-1M5A8F1 160 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 WISP1O95388 367 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 CER1O95813 267 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 HDCP19113 662 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 NDUFV2P19404 249 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 TNFSF9P41273 254 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 MATKP42679 507 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 KCNB1Q14721 858 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 DDR2Q16832 855 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 FILIP1Q7Z7B0 1213 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 METTL23Q86XA0 190 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 DCP1BQ8IZD4 617 aaKnown RBP14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 ZNF513Q8N8E2 541 aaPredicted RBP14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 DNASE2BQ8WZ79 361 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 FOXJ1Q92949 421 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 CD248Q9HCU0 757 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 CD93Q9NPY3 652 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 HCN2Q9UL51 889 aa14.94□□□□□ -0.02
NKX3-1-202ENST00000523261 ANO9A1A5B4 782 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 LEFTY2O00292 366 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 PIRO00625 290 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 SLC16A4O15374 487 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 CLDN3O15551 220 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 NDUFS2O75306 463 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 HOXB2P14652 356 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 MUTP22033 750 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 KRT2P35908 639 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 RPL10AP62906 217 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 ATP2C1P98194 919 aaPredicted RBP14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 SEMG2Q02383 582 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 MYO1EQ12965 1108 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 MAPK7Q13164 816 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 STK3Q13188 491 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 ENOX2Q16206 610 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 ECM1Q16610 540 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 HLA-BQ31612 363 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 WSCD1Q658N2 575 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 RHBDF2Q6PJF5 856 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 DHRS13Q6UX07 377 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 ZPBP2Q6X784 338 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 TRMT11Q7Z4G4 463 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 ZCCHC9Q8N567 271 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 ERMNQ8TAM6 284 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 KCNV2Q8TDN2 545 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 TSPAN18Q96SJ8 248 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 LARP6Q9BRS8 491 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 COL12A1Q99715 3063 aa14.93□□□□□ -0.02
NKX3-1-202ENST00000523261 B8ZZF3 427 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 CYB561D2O14569 222 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 TNFSF14O43557 240 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 DTNBO60941 627 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 HIP1RO75146 1068 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 ADRB2P07550 413 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 WASP42768 502 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 NFE2Q16621 373 aaPredicted RBP14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 TAF1BQ53T94 588 aaPredicted RBP14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 TMPRSS12Q86WS5 348 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 MIB1Q86YT6 1006 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 KIAA1958Q8N8K9 716 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 FSIP1Q8NA03 581 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 SNIP1Q8TAD8 396 aaKnown RBP14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 WBP1Q96G27 269 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 NFE2L3Q9Y4A8 694 aa14.92□□□□□ -0.02
NKX3-1-202ENST00000523261 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 BTBD18B2RXH4 712 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms