RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 POLR2FP61218 127 aaKnown RBP16.92■□□□□ 0.3
SSBP1-214ENST00000498107 MEA1Q16626 185 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 ARHGAP15Q53QZ3 475 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 SDHAF4Q5VUM1 108 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 LCLAT1Q6UWP7 414 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 CLEC20AQ6ZU45 233 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 GET4Q7L5D6 327 aaPredicted RBP16.92■□□□□ 0.3
SSBP1-214ENST00000498107 FAM71AQ8IYT1 594 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 HS6ST3Q8IZP7 471 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 GPR152Q8TDT2 470 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 RPGRIP1Q96KN7 1286 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 NAP1L5Q96NT1 182 aaPredicted RBP16.92■□□□□ 0.3
SSBP1-214ENST00000498107 SPAG5Q96R06 1193 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 SMOQ99835 787 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 LRRC3Q9BY71 257 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 UBXN6Q9BZV1 441 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 GANQ9H2C0 597 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 GDE1Q9NZC3 331 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 TSPAN16Q9UKR8 245 aa16.92■□□□□ 0.3
SSBP1-214ENST00000498107 MAGED2Q9UNF1 606 aaPredicted RBP16.92■□□□□ 0.3
SSBP1-214ENST00000498107 DOCK6Q96HP0 2047 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 O00370 1275 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 FOXN3O00409 490 aaPredicted RBP16.91■□□□□ 0.3
SSBP1-214ENST00000498107 SETSIPP0DME0 302 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 HMGA1P17096 107 aaKnown RBP16.91■□□□□ 0.3
SSBP1-214ENST00000498107 GABRR2P28476 465 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 GNA15P30679 374 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 PPP3CCP48454 512 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 KLK7P49862 253 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 NTHL1P78549 312 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 BST2Q10589 180 aaKnown RBP16.91■□□□□ 0.3
SSBP1-214ENST00000498107 GOLGA7BQ2TAP0 167 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 PRSS36Q5K4E3 855 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 CACNA2D4Q7Z3S7 1137 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 TMC8Q8IU68 726 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 FEZF2Q8TBJ5 459 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 IQCDQ96DY2 449 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 KCNK16Q96T55 309 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 TTLL2Q9BWV7 592 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 ATXN3LQ9H3M9 355 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 FBXO44Q9H4M3 255 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 CDH7Q9ULB5 785 aa16.91■□□□□ 0.3
SSBP1-214ENST00000498107 TCF20Q9UGU0 1960 aaKnown RBP16.9■□□□□ 0.3
SSBP1-214ENST00000498107 SOBPA7XYQ1 873 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 LOC730098B7Z3J9 87 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 F8VZ95 297 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 THAP12O43422 761 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 BRD2P25440 801 aaKnown RBP16.9■□□□□ 0.3
SSBP1-214ENST00000498107 STAT1P42224 750 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 CACNA2D1P54289 1103 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 ZP2Q05996 745 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 PDZD8Q8NEN9 1154 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 ITFG1Q8TB96 612 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 ADAMTS19Q8TE59 1207 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 MRPS31Q92665 395 aaKnown RBP16.9■□□□□ 0.3
SSBP1-214ENST00000498107 FGF13Q92913 245 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 SLITRK1Q96PX8 696 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 NUP58Q9BVL2 599 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 IFNKQ9P0W0 207 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 AJAP1Q9UKB5 411 aaPredicted RBP16.9■□□□□ 0.3
SSBP1-214ENST00000498107 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.9■□□□□ 0.3
SSBP1-214ENST00000498107 NOTCH4Q99466 2003 aa16.9■□□□□ 0.3
SSBP1-214ENST00000498107 XIRP2A4UGR9 3374 aa16.89■□□□□ 0.3
SSBP1-214ENST00000498107 A0A1W2PRU2 124 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 XPO1O14980 1071 aaKnown RBP16.89■□□□□ 0.29
SSBP1-214ENST00000498107 CYP26A1O43174 497 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 CCDC172P0C7W6 258 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 LAMP2P13473 410 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 DDX6P26196 483 aaKnown RBP eCLIP16.89■□□□□ 0.29
SSBP1-214ENST00000498107 YWHAQP27348 245 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 SLC5A3P53794 718 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 MTMR3Q13615 1198 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 SLC5A9Q2M3M2 681 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 ZDHHC14Q8IZN3 488 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 ZMIZ2Q8NF64 920 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 SHKBP1Q8TBC3 707 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 ZNF606Q8WXB4 792 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 OVCA2Q8WZ82 227 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 TFAP2BQ92481 460 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 EDEM3Q9BZQ6 932 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 ZNF334Q9HCZ1 680 aaPredicted RBP16.89■□□□□ 0.29
SSBP1-214ENST00000498107 NLRC4Q9NPP4 1024 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 TMEM30AQ9NV96 361 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 TRPM5Q9NZQ8 1165 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 EPS15L1Q9UBC2 864 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 MYO6Q9UM54 1294 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 GREB1Q4ZG55 1949 aa16.89■□□□□ 0.29
SSBP1-214ENST00000498107 C19orf67A6NJJ6 358 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 C2CD4DB7Z1M9 353 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 M0QYV0 167 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 TNFRSF10BO14763 440 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 BEST1O76090 585 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 F11P03951 625 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 SSTR3P32745 418 aaPredicted RBP16.88■□□□□ 0.29
SSBP1-214ENST00000498107 KRT9P35527 623 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 SOX5P35711 763 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 CCR2P41597 374 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 PLA2G4AP47712 749 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 PDE6CP51160 858 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 JAM2P57087 298 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms