RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 MAPK8P45983 427 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 PPP3CCP48454 512 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 WNT7BP56706 349 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 CYP27A1Q02318 531 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 GRIN1Q05586 938 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 SF3A1Q15459 793 aaKnown RBP15.24■□□□□ 0.03
VARS-228ENST00000495010 CCDC142Q17RM4 750 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 SOWAHAQ2M3V2 549 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 EOGTQ5NDL2 527 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 FAM171BQ6P995 826 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 DENND5BQ6ZUT9 1274 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 ARMCX6Q7L4S7 300 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 DPH6Q7L8W6 267 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 FILIP1Q7Z7B0 1213 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 SPATA17Q96L03 361 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 CEP295NLQ96MC4 621 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 PNKPQ96T60 521 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 MTMR12Q9C0I1 747 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 STK17AQ9UEE5 414 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 CDH9Q9ULB4 789 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 SMC3Q9UQE7 1217 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 MYO16Q9Y6X6 1858 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 KIAA1549LQ6ZVL6 1849 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 CACNA1GO43497 2377 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 CHD6Q8TD26 2715 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 TNFRSF10BO14763 440 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 TRIM66O15016 1216 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 ATP2C2O75185 946 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 PPP1R37O75864 691 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 TOP3BO95985 862 aaKnown RBP15.23■□□□□ 0.03
VARS-228ENST00000495010 TNNC2P02585 160 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 CYP17A1P05093 508 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 RDXP35241 583 aaKnown RBP15.23■□□□□ 0.03
VARS-228ENST00000495010 TIE1P35590 1138 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 TXLNAP40222 546 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 ATXN3P54252 364 aaPredicted RBP15.23■□□□□ 0.03
VARS-228ENST00000495010 PSMC1P62191 440 aaKnown RBP15.23■□□□□ 0.03
VARS-228ENST00000495010 KCNA1Q09470 495 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 RESTQ13127 1097 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 RABEP1Q15276 862 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 HSF5Q4G112 596 aaPredicted RBP15.23■□□□□ 0.03
VARS-228ENST00000495010 LARP1BQ659C4 914 aaKnown RBP15.23■□□□□ 0.03
VARS-228ENST00000495010 KIAA1211LQ6NV74 962 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 SV2BQ7L1I2 683 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 BRAPQ7Z569 592 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 TMEFF1Q8IYR6 380 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 ALLCQ8N6M5 410 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 TXNDC5Q8NBS9 432 aaKnown RBP15.23■□□□□ 0.03
VARS-228ENST00000495010 ZSWIM2Q8NEG5 633 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 RLN3Q8WXF3 142 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 MYLPFQ96A32 169 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 HPDLQ96IR7 371 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 PCIF1Q9H4Z3 704 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 PDE11AQ9HCR9 933 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 ABCA7Q8IZY2 2146 aa15.23■□□□□ 0.03
VARS-228ENST00000495010 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.22■□□□□ 0.03
VARS-228ENST00000495010 KAT7O95251 611 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 ADH1CP00326 375 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 PDGFRBP09619 1106 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 IDEP14735 1019 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 P2RY2P41231 377 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 SLC7A9P82251 487 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 ALCAMQ13740 583 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 COL9A2Q14055 689 aaPredicted RBP15.22■□□□□ 0.03
VARS-228ENST00000495010 DHCR24Q15392 516 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 RRAGBQ5VZM2 374 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 LYSMD4Q5XG99 296 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 TMEM92Q6UXU6 159 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 SYT12Q8IV01 421 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 ADGRG2Q8IZP9 1017 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 GPD1LQ8N335 351 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 HDDC3Q8N4P3 179 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 KIAA1958Q8N8K9 716 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 OLIG1Q8TAK6 271 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 HMGB4Q8WW32 186 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 ZCCHC14Q8WYQ9 949 aaKnown RBP15.22■□□□□ 0.03
VARS-228ENST00000495010 EPSTI1Q96J88 318 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 TMX3Q96JJ7 454 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 MMS19Q96T76 1030 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 STRA6Q9BX79 667 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 SMPD4Q9NXE4 827 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 WASF3Q9UPY6 502 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 CPQQ9Y646 472 aa15.22■□□□□ 0.03
VARS-228ENST00000495010 CFIP05156 583 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 ENGP17813 658 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 LMO2P25791 158 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 EIF2DP41214 584 aaKnown RBP15.21■□□□□ 0.03
VARS-228ENST00000495010 GRIA2P42262 883 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 SLC6A11P48066 632 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 USP46P62068 366 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 ZXDBP98169 803 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 SURF1Q15526 300 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 SPDYCQ5MJ68 293 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 TDRD10Q5VZ19 366 aaKnown RBP15.21■□□□□ 0.03
VARS-228ENST00000495010 HS2ST1Q7LGA3 356 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 DDX42Q86XP3 938 aaKnown RBP eCLIP15.21■□□□□ 0.03
VARS-228ENST00000495010 IL17RCQ8NAC3 791 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 GATA6Q92908 595 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 FAM84AQ96KN4 292 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms