RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 BBS5Q8N3I7 341 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 PRCCQ92733 491 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 TMEM176AQ96HP8 235 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 TMEM121Q9BTD3 319 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 ZFATQ9P243 1243 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 COL18A1P39060 1754 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 A0A0A6YYK5 440 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-218ENST00000482171 CCDC195A0A1B0GUA6 201 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 NFICP08651 508 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 NCAM1P13591 858 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 ELF3P78545 371 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-218ENST00000482171 IFI35P80217 286 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-218ENST00000482171 NR1H3Q13133 447 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 DCAF4L1Q3SXM0 396 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 ZBTB41Q5SVQ8 909 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 CXCL17Q6UXB2 119 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 RGS9BPQ6ZS82 235 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 PRDM5Q9NQX1 630 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-218ENST00000482171 SNCAIPQ9Y6H5 919 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 ZWINTO95229 277 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 PGK1P00558 417 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 POMCP01189 267 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 GHRP10912 638 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 KDSRQ06136 332 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 ITIH4Q14624 930 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 FOXR2Q6PJQ5 311 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 TRMT10CQ7L0Y3 403 aaKnown RBP11.79□□□□□ -0.52
SMPD4-218ENST00000482171 PALB2Q86YC2 1186 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 SLC9A9Q8IVB4 645 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 RXFP2Q8WXD0 754 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 TSPAN16Q9UKR8 245 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 FAM47DPA6NHR8 397 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 SPDYE5A6NIY4 337 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 VDRP11473 427 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 SPIRE1Q08AE8 756 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 SREBF2Q12772 1141 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 CDKL3Q8IVW4 592 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-218ENST00000482171 SKA2Q8WVK7 121 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-218ENST00000482171 FSD1LQ9BXM9 530 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 PLEKHA5Q9HAU0 1116 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 CYP4F11Q9HBI6 524 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 ANLNQ9NQW6 1124 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 GDF3Q9NR23 364 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 XPO7Q9UIA9 1087 aaKnown RBP11.79□□□□□ -0.52
SMPD4-218ENST00000482171 SALL4Q9UJQ4 1053 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 PCDHGC5Q9Y5F6 944 aa11.79□□□□□ -0.52
SMPD4-218ENST00000482171 AGPSO00116 658 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 CYB561D2O14569 222 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 MAGEA4P43358 317 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 HGSNATQ68CP4 663 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 YTHDF3Q7Z739 585 aaKnown RBP11.78□□□□□ -0.52
SMPD4-218ENST00000482171 EXT2Q93063 718 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 TTC25Q96NG3 672 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 CDT1Q9H211 546 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 PAPOLBQ9NRJ5 636 aaKnown RBP11.78□□□□□ -0.52
SMPD4-218ENST00000482171 ABI2Q9NYB9 513 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-218ENST00000482171 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 NFASCO94856 1347 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 MAFO75444 373 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-218ENST00000482171 AP1G2O75843 785 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 FAM200BP0CF97 657 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 MX2P20592 715 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 OTUD4Q01804 1114 aaKnown RBP11.78□□□□□ -0.52
SMPD4-218ENST00000482171 GPR142Q7Z601 462 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 TRIM42Q8IWZ5 723 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 SLC26A7Q8TE54 656 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 PPWD1Q96BP3 646 aaKnown RBP11.78□□□□□ -0.52
SMPD4-218ENST00000482171 TYW5A2RUC4 315 aaKnown RBP11.78□□□□□ -0.52
SMPD4-218ENST00000482171 F8VP50 259 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 M0QYT0 321 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 CPA2P48052 419 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-218ENST00000482171 NCKAP1LP55160 1127 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 MFSD10Q14728 455 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 STAT4Q14765 748 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 ATP13A4Q4VNC1 1196 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 FBXO47Q5MNV8 452 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 RABGAP1LQ5R372 815 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 TMC3Q7Z5M5 1100 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 DAW1Q8N136 415 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 LRRC43Q8N309 656 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 TEX9Q8N6V9 391 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 ACTL9Q8TC94 416 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 FAM172AQ8WUF8 416 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 SHC3Q92529 594 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 KREMEN1Q96MU8 473 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 C10orf88Q9H8K7 445 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 ABCF3Q9NUQ8 709 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 BFARQ9NZS9 450 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 KCNH4Q9UQ05 1017 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 STRCP1A6NGW2 1772 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 MYPNQ86TC9 1320 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 MYO9BQ13459 2157 aa11.78□□□□□ -0.52
SMPD4-218ENST00000482171 E2F8A0AVK6 867 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 CES2O00748 559 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 RARAP10276 462 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 ZACNQ401N2 412 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 SCUBE3Q8IX30 993 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 AGAP11Q8TF27 550 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms