RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-204	ENST00000478061	CNGA2	Q16280	664 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	LCLAT1	Q6UWP7	414 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	DENND5B	Q6ZUT9	1274 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	GAREM2	Q75VX8	874 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	PDZD4	Q76G19	769 aa	Predicted RBP	13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	TTC30A	Q86WT1	665 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	ADHFE1	Q8IWW8	467 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	ANKRD52	Q8NB46	1076 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	TCEAL4	Q96EI5	215 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	MYRFL	Q96LU7	910 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	RBSN	Q9H1K0	784 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	ACP6	Q9NPH0	428 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	NLRC4	Q9NPP4	1024 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	PRKAG3	Q9UGI9	489 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	TSPAN16	Q9UKR8	245 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	MRPS23	Q9Y3D9	190 aa	Known RBP	13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	NOTCH4	Q99466	2003 aa		13.55	□□□□□ -0.24
RBM28-204	ENST00000478061	UNC80	Q8N2C7	3258 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	HHLA1	C9JL84	531 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061		F8VZ95	297 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	ZNF197	O14709	1029 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	MICAL2	O94851	1124 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	CEBPB	P17676	345 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	SP100	P23497	879 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	CLCN1	P35523	988 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	PBX1	P40424	430 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	JAM2	P57087	298 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	USP46	P62068	366 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	ZP2	Q05996	745 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	PKDCC	Q504Y2	493 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	GET4	Q7L5D6	327 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	OTOP3	Q7RTS5	596 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	TMEM150A	Q86TG1	271 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	NUP93	Q8N1F7	819 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	SHKBP1	Q8TBC3	707 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	UBA3	Q8TBC4	463 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	ING5	Q8WYH8	240 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	TRMT2B	Q96GJ1	504 aa	Known RBP	13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	RPGRIP1	Q96KN7	1286 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	MYADM	Q96S97	322 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	TTLL2	Q9BWV7	592 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	UST	Q9Y2C2	406 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061	C5orf42	Q9H799	3197 aa		13.54	□□□□□ -0.24
RBM28-204	ENST00000478061		A0A1W2PRU2	124 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	C2CD4D	B7Z1M9	353 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	LOC730098	B7Z3J9	87 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	THAP12	O43422	761 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	FGF19	O95750	216 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	F11	P03951	625 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	GJA1	P17302	382 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	GABRR2	P28476	465 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	GNA15	P30679	374 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	GBP2	P32456	591 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	SSTR3	P32745	418 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	SLC5A3	P53794	718 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	BCAT1	P54687	386 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	PTK2	Q05397	1052 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	PDE4C	Q08493	712 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	BST2	Q10589	180 aa	Known RBP	13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	STIL	Q15468	1287 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	POTEH	Q6S545	545 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	GPRIN1	Q7Z2K8	1008 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	SLC47A2	Q86VL8	602 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	NPAS3	Q8IXF0	933 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	SCAMP5	Q8TAC9	235 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	ZNF606	Q8WXB4	792 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	FGF13	Q92913	245 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	NECAB3	Q96P71	396 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	ANP32E	Q9BTT0	268 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	UBXN6	Q9BZV1	441 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	XPO4	Q9C0E2	1151 aa	Known RBP	13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	PNPLA8	Q9NP80	782 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	IL37	Q9NZH6	218 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	UXT	Q9UBK9	157 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	HESX1	Q9UBX0	185 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	CDH7	Q9ULB5	785 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	NR2E1	Q9Y466	385 aa		13.53	□□□□□ -0.24
RBM28-204	ENST00000478061	C19orf67	A6NJJ6	358 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061		M0QYV0	167 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	TULP2	O00295	520 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	XPO1	O14980	1071 aa	Known RBP	13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	MED7	O43513	233 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	TADA3	O75528	432 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	RTN3	O95197	1032 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	CFH	P08603	1231 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	SETSIP	P0DME0	302 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	CDC25C	P30307	473 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	SOX5	P35711	763 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	BPIFB4	P59827	614 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	TEAD2	Q15562	447 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	DENND1B	Q6P3S1	775 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	PIGZ	Q86VD9	579 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	TDRD5	Q8NAT2	981 aa	Known RBP	13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	ADAMTS19	Q8TE59	1207 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	ACSF2	Q96CM8	615 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	SPAG5	Q96R06	1193 aa		13.52	□□□□□ -0.25
RBM28-204	ENST00000478061	ATXN3L	Q9H3M9	355 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms