RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 FAXCQ5TGI0 409 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 RGS7BPQ6MZT1 257 aaPredicted RBP7.01□□□□□ -1.29
VPS50-212ENST00000476413 MRNIPQ6NTE8 343 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 SMCR8Q8TEV9 937 aaPredicted RBP7.01□□□□□ -1.29
VPS50-212ENST00000476413 FUBP1Q96AE4 644 aaKnown RBP7.01□□□□□ -1.29
VPS50-212ENST00000476413 C20orf173Q96LM9 149 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 BDH2Q9BUT1 245 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 GBA2Q9HCG7 927 aaPredicted RBP7.01□□□□□ -1.29
VPS50-212ENST00000476413 ZBTB26Q9HCK0 441 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 AKIP1Q9NQ31 210 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 ITM2CQ9NQX7 267 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 CEP72Q9P209 647 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 A0A0B4J269 797 aa7□□□□□ -1.29
VPS50-212ENST00000476413 MYADML2A6NDP7 307 aa7□□□□□ -1.29
VPS50-212ENST00000476413 AGPSO00116 658 aa7□□□□□ -1.29
VPS50-212ENST00000476413 RNASET2O00584 256 aaKnown RBP7□□□□□ -1.29
VPS50-212ENST00000476413 DHHO43323 396 aa7□□□□□ -1.29
VPS50-212ENST00000476413 FAM20BO75063 409 aa7□□□□□ -1.29
VPS50-212ENST00000476413 CCT5P48643 541 aa7□□□□□ -1.29
VPS50-212ENST00000476413 VAV2P52735 878 aa7□□□□□ -1.29
VPS50-212ENST00000476413 SLC25A3Q00325 362 aa7□□□□□ -1.29
VPS50-212ENST00000476413 SP2Q02086 613 aa7□□□□□ -1.29
VPS50-212ENST00000476413 FPGSQ05932 587 aa7□□□□□ -1.29
VPS50-212ENST00000476413 TUBB3Q13509 450 aa7□□□□□ -1.29
VPS50-212ENST00000476413 IL17DQ8TAD2 202 aa7□□□□□ -1.29
VPS50-212ENST00000476413 SNX19Q92543 992 aa7□□□□□ -1.29
VPS50-212ENST00000476413 GCC1Q96CN9 775 aa7□□□□□ -1.29
VPS50-212ENST00000476413 RNF31Q96EP0 1072 aa7□□□□□ -1.29
VPS50-212ENST00000476413 ALOXE3Q9BYJ1 711 aa7□□□□□ -1.29
VPS50-212ENST00000476413 SLC25A32Q9H2D1 315 aa7□□□□□ -1.29
VPS50-212ENST00000476413 UNKLQ9H9P5 680 aaKnown RBP7□□□□□ -1.29
VPS50-212ENST00000476413 F5H697 171 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 HSD3B1P14060 373 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 HGFP14210 728 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 ADORA2AP29274 412 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 CD6P30203 668 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 PRKAG1P54619 331 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 SATB1Q01826 763 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 NSUN2Q08J23 767 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS50-212ENST00000476413 RESTQ13127 1097 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 PPFIA1Q13136 1202 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 PRKG1Q13976 671 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 E2F2Q14209 437 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 SP5Q6BEB4 398 aaPredicted RBP6.99□□□□□ -1.29
VPS50-212ENST00000476413 SFRP4Q6FHJ7 346 aaPredicted RBP6.99□□□□□ -1.29
VPS50-212ENST00000476413 ABLIM2Q6H8Q1 611 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 TMEM171Q8WVE6 324 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 LTV1Q96GA3 475 aaPredicted RBP6.99□□□□□ -1.29
VPS50-212ENST00000476413 LOXL4Q96JB6 756 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 PRPF18Q99633 342 aaKnown RBP6.99□□□□□ -1.29
VPS50-212ENST00000476413 AMBRA1Q9C0C7 1298 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 GALNT9Q9HCQ5 603 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 CASS4Q9NQ75 786 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 SERTAD3Q9UJW9 196 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 CA14Q9ULX7 337 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 TCAF1Q9Y4C2 921 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 HS3ST4Q9Y661 456 aa6.99□□□□□ -1.29
VPS50-212ENST00000476413 NPHP1O15259 732 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 NTSR2O95665 410 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 GLP2RO95838 553 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 ERBB2P04626 1255 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 HLA-DOAP06340 250 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 HNRNPMP52272 730 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS50-212ENST00000476413 BCAT1P54687 386 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 TIAL1Q01085 375 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS50-212ENST00000476413 SCAPQ12770 1279 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 PRKD1Q15139 912 aaPredicted RBP6.98□□□□□ -1.29
VPS50-212ENST00000476413 TRIM71Q2Q1W2 868 aaKnown RBP6.98□□□□□ -1.29
VPS50-212ENST00000476413 PREPLQ4J6C6 727 aaPredicted RBP6.98□□□□□ -1.29
VPS50-212ENST00000476413 ICE2Q659A1 982 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 SULT6B1Q6IMI4 303 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 SLC15A3Q8IY34 581 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 SPARTQ8N0X7 666 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 GALNT15Q8N3T1 639 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 TTC9BQ8N6N2 239 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 OTUD7AQ8TE49 926 aaPredicted RBP6.98□□□□□ -1.29
VPS50-212ENST00000476413 ZDHHC12Q96GR4 267 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 KRTAP3-1Q9BYR8 98 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 DEF6Q9H4E7 631 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 ZNF703Q9H7S9 590 aaPredicted RBP6.98□□□□□ -1.29
VPS50-212ENST00000476413 MLXIPQ9HAP2 919 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 AURKAIP1Q9NWT8 199 aaPredicted RBP6.98□□□□□ -1.29
VPS50-212ENST00000476413 DNAJB11Q9UBS4 358 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 LPAR3Q9UBY5 353 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 GTF2A1LQ9UNN4 478 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 SNX14Q9Y5W7 946 aa6.98□□□□□ -1.29
VPS50-212ENST00000476413 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 ZAR1LA6NP61 321 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 RGS10O43665 173 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 TRIAP1O43715 76 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 COQ9O75208 318 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 NTSR1P30989 418 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 UQCRC1P31930 480 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 ARL4CP56559 192 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 POU5F1BQ06416 359 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 ATP1A4Q13733 1029 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 TAF5Q15542 800 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 CERCAMQ5T4B2 595 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 MZT2AQ6P582 158 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 LVRNQ6Q4G3 990 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms