RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 CLSTN2Q9H4D0 955 aa13.4□□□□□ -0.26
PPP1R3F-204ENST00000471261 DMAP1Q9NPF5 467 aaPredicted RBP13.4□□□□□ -0.26
PPP1R3F-204ENST00000471261 ZMYM5Q9UJ78 669 aa13.4□□□□□ -0.26
PPP1R3F-204ENST00000471261 CCL26Q9Y258 94 aa13.4□□□□□ -0.26
PPP1R3F-204ENST00000471261 SIT1Q9Y3P8 196 aa13.4□□□□□ -0.26
PPP1R3F-204ENST00000471261 ARIH1Q9Y4X5 557 aaPredicted RBP13.4□□□□□ -0.26
PPP1R3F-204ENST00000471261 ZNF318Q5VUA4 2279 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 MUC6Q6W4X9 2439 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 TRAV19A0A0A6YYK7 116 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 KANSL1LA0AUZ9 987 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 C2orf78A6NCI8 922 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 CKMP06732 381 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 STARD6P59095 220 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 MCCD1P59942 119 aaPredicted RBP13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 FCHO2Q0JRZ9 810 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 LRMPQ12912 555 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 ZNF852Q6ZMS4 543 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 CLEC17AQ6ZS10 378 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 PAQR9Q6ZVX9 377 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 CRYBG2Q8N1P7 616 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 PJA1Q8NG27 643 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 TTC8Q8TAM2 541 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 USP13Q92995 863 aaPredicted RBP13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 TATDN2Q93075 761 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 ARID3AQ99856 593 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 SRRTQ9BXP5 876 aaKnown RBP13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 NUP62CLQ9H1M0 184 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 CISHQ9NSE2 258 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 TDP1Q9NUW8 608 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 THG1LQ9NWX6 298 aaKnown RBP13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 OBP2AQ9NY56 170 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 TRPM5Q9NZQ8 1165 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 PIAS3Q9Y6X2 628 aa13.39□□□□□ -0.27
PPP1R3F-204ENST00000471261 FAM170BA6NMN3 283 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 CHADO15335 359 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 CILPO75339 1184 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 FGFR1OPO95684 399 aaKnown RBP13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 GNA14O95837 355 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 USP17L7P0C7H9 530 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 FAM200BP0CF97 657 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 YWHAQP27348 245 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 WEE1P30291 646 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 FMO5P49326 533 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 KPNA1P52294 538 aaPredicted RBP13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 SLC5A3P53794 718 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 PTPN5P54829 565 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 MAP3K7CLP57077 242 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 CETN1Q12798 172 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 TAF10Q12962 218 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 NUP93Q8N1F7 819 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 ARL14EPQ8N8R7 260 aaPredicted RBP13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 FBXO32Q969P5 355 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 JAKMIP2Q96AA8 810 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 CYFIP2Q96F07 1278 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 HEXIM2Q96MH2 286 aaKnown RBP13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 SLITRK1Q96PX8 696 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 SLC22A12Q96S37 553 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 LMBRD1Q9NUN5 540 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 RWDD2AQ9UIY3 292 aa13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 MTF2Q9Y483 593 aaPredicted RBP13.38□□□□□ -0.27
PPP1R3F-204ENST00000471261 SOBPA7XYQ1 873 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 H0Y858 1186 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 GOLGA6L22H0YM25 854 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 BEST1O76090 585 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 RTN3O95197 1032 aaPredicted RBP13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 HDCP19113 662 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 PLA2G5P39877 138 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 NUBP1P53384 320 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 TNK2Q07912 1038 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 TCF15Q12870 199 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 CUL2Q13617 745 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 ARHGAP29Q52LW3 1261 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 CC2D1AQ6P1N0 951 aaPredicted RBP13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 FOXR2Q6PJQ5 311 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 TTC39CQ8N584 583 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 DTWD2Q8NBA8 298 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 SCAMP5Q8TAC9 235 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 WHAMMQ8TF30 809 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 SMOQ99835 787 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 DDX23Q9BUQ8 820 aaKnown RBP13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 TTLL2Q9BWV7 592 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 KIF9Q9HAQ2 790 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 LTB4R2Q9NPC1 389 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 GTSE1Q9NYZ3 720 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 NDRG2Q9UN36 371 aaKnown RBP13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 MRPS17Q9Y2R5 130 aaKnown RBP13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 COQ4Q9Y3A0 265 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 COL4A3Q01955 1670 aa13.37□□□□□ -0.27
PPP1R3F-204ENST00000471261 ZNF840PA6NDX5 716 aa13.36□□□□□ -0.27
PPP1R3F-204ENST00000471261 ARNTLO00327 626 aa13.36□□□□□ -0.27
PPP1R3F-204ENST00000471261 MAN2B1O00754 1011 aa13.36□□□□□ -0.27
PPP1R3F-204ENST00000471261 CCDC192P0DO97 292 aa13.36□□□□□ -0.27
PPP1R3F-204ENST00000471261 SOX9P48436 509 aa13.36□□□□□ -0.27
PPP1R3F-204ENST00000471261 PPP3CCP48454 512 aa13.36□□□□□ -0.27
PPP1R3F-204ENST00000471261 PDE6CP51160 858 aa13.36□□□□□ -0.27
PPP1R3F-204ENST00000471261 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
PPP1R3F-204ENST00000471261 NHLH1Q02575 133 aa13.36□□□□□ -0.27
PPP1R3F-204ENST00000471261 KCNH2Q12809 1159 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 645.4 ms