RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 DIAPH2O60879 1101 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 YWHAHQ04917 246 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-203ENST00000467558 MORF4L2Q15014 288 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 TDRD10Q5VZ19 366 aaKnown RBP14.36□□□□□ -0.11
BRAT1-203ENST00000467558 PPWD1Q96BP3 646 aaKnown RBP14.36□□□□□ -0.11
BRAT1-203ENST00000467558 SDCCAG3Q96C92 435 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 WWP1Q9H0M0 922 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 SUN2Q9UH99 717 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 CCDC22O60826 627 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 CCNE2O96020 404 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 PYGMP11217 842 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ALDH1A3P47895 512 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 HARS2P49590 506 aaKnown RBP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 E2F5Q15329 346 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 IL31Q6EBC2 164 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 LRRC6Q86X45 466 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 KRT82Q9NSB4 513 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ZNF541Q9H0D2 1346 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 DCDC2CA8MYV0 355 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ZWINTO95229 277 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 GEMIN4P57678 1058 aaKnown RBP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 PCBP1Q15365 356 aaKnown RBP eCLIP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ATP6V0D2Q8N8Y2 350 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ZNF473Q8WTR7 871 aaKnown RBP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 PTPRN2Q92932 1015 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 STAMBPL1Q96FJ0 436 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 SYT15Q9BQS2 421 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 TRPC7Q9HCX4 862 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 NSMCE4AQ9NXX6 385 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 DDX43Q9NXZ2 648 aaKnown RBP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 LUC7L3O95232 432 aaKnown RBP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 NSUN2Q08J23 767 aaKnown RBP eCLIP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 C3orf20Q8ND61 904 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ETNK1Q9HBU6 452 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ALG13Q9NP73 1137 aaKnown RBP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 USH1CQ9Y6N9 552 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ACAP1Q15027 740 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 MDH1BQ5I0G3 518 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 GPR142Q7Z601 462 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 SEPT8Q92599 483 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ACO2Q99798 780 aaKnown RBP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 TMEM121Q9BTD3 319 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 NAT9Q9BTE0 207 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 VCX3AQ9NNX9 186 aa14.35□□□□□ -0.11
BRAT1-203ENST00000467558 SARS2Q9NP81 518 aaKnown RBP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-203ENST00000467558 ZMYM2Q9UBW7 1377 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 H7C4K7 107 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 ANXA9O76027 345 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 FARP2O94887 1054 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-203ENST00000467558 CASP2P42575 452 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 MAP3K7CLP57077 242 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 NFIL3Q16649 462 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 LINC00523Q86TU6 105 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 CCNJLQ8IV13 435 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 CALML6Q8TD86 181 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 GPATCH2LQ9NWQ4 482 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 NEMP1O14524 444 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 MEFVO15553 781 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-203ENST00000467558 RECQL4O94761 1208 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 MAP2K2P36507 400 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 TKTL1P51854 596 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 L3MBTL3Q96JM7 780 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-203ENST00000467558 CDT1Q9H211 546 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 KANSL3Q9P2N6 904 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 CASTOR2A6NHX0 329 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 BTNL10A8MVZ5 291 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 USP2O75604 605 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-203ENST00000467558 MAP3K6O95382 1288 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 VCPP55072 806 aaKnown RBP14.34□□□□□ -0.11
BRAT1-203ENST00000467558 KIF19Q2TAC6 998 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 FAXCQ5TGI0 409 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 TAS2R42Q7RTR8 314 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 IRF2BP2Q7Z5L9 587 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
BRAT1-203ENST00000467558 USP15Q9Y4E8 981 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-203ENST00000467558 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.11
BRAT1-203ENST00000467558 PHF20L1A8MW92 1017 aa14.33□□□□□ -0.11
BRAT1-203ENST00000467558 MICAL2O94851 1124 aa14.33□□□□□ -0.11
BRAT1-203ENST00000467558 GHRP10912 638 aa14.33□□□□□ -0.11
BRAT1-203ENST00000467558 ELAVL2Q12926 359 aaKnown RBP14.33□□□□□ -0.11
BRAT1-203ENST00000467558 MAP2K5Q13163 448 aa14.33□□□□□ -0.11
BRAT1-203ENST00000467558 USP10Q14694 798 aaKnown RBP14.33□□□□□ -0.11
BRAT1-203ENST00000467558 ZNF669Q96BR6 464 aaPredicted RBP14.33□□□□□ -0.11
BRAT1-203ENST00000467558 TRPV2Q9Y5S1 764 aa14.33□□□□□ -0.11
BRAT1-203ENST00000467558 OVOS1Q6IE37 1185 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 SLC51AQ86UW1 340 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 CLEC4DQ8WXI8 215 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 TSPAN17Q96FV3 270 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 TSSK1BQ9BXA7 367 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 FGFBP2Q9BYJ0 223 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 CDC42EP4Q9H3Q1 356 aaKnown RBP14.33□□□□□ -0.12
BRAT1-203ENST00000467558 PCDH9Q9HC56 1237 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 C20orf96Q9NUD7 363 aaPredicted RBP14.33□□□□□ -0.12
BRAT1-203ENST00000467558 RRN3Q9NYV6 651 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 SMIM24O75264 130 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 RPL10AP62906 217 aaKnown RBP14.33□□□□□ -0.12
BRAT1-203ENST00000467558 YWHAZP63104 245 aaKnown RBP14.33□□□□□ -0.12
BRAT1-203ENST00000467558 STX3Q13277 289 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms