RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 OSTM1Q86WC4 334 aa18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 ADGRG2Q8IZP9 1017 aa18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 KCTD17Q8N5Z5 321 aa18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 CXorf38Q8TB03 319 aa18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 SPACA7Q96KW9 195 aa18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 LLPHQ9BRT6 129 aaKnown RBP18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 DDX43Q9NXZ2 648 aaKnown RBP18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 CIZ1Q9ULV3 898 aaPredicted RBP18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 SLC6A14Q9UN76 642 aa18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 ACACAQ13085 2346 aa18.46■□□□□ 0.55
UBE2D4-209ENST00000454428 A0A0A0MRY4 1105 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 LEFTY2O00292 366 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 CFIP05156 583 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 HDCP19113 662 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 HOXD12P35452 270 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 TIE1P35590 1138 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 ATP2C1P98194 919 aaPredicted RBP18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 CFAP221Q4G0U5 840 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 ADALQ6DHV7 355 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 FILIP1Q7Z7B0 1213 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 MYCT1Q8N699 235 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 HMGB4Q8WW32 186 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 CAMK1GQ96NX5 476 aa18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 BBC3Q96PG8 261 aaPredicted RBP18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 GTPBP2Q9BX10 602 aaKnown RBP18.45■□□□□ 0.54
UBE2D4-209ENST00000454428 TRAK2O60296 914 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 SERPINF2P08697 491 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 SCP2P22307 547 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 USP46P62068 366 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 KCNB1Q14721 858 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 DHCR24Q15392 516 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 DUOXA1Q1HG43 343 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 ZNF423Q2M1K9 1284 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 PHTF2Q8N3S3 785 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 HDDC3Q8N4P3 179 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 MINDY1Q8N5J2 469 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 DEFB119Q8N690 84 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 FAM84AQ96KN4 292 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 PARVGQ9HBI0 331 aa18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 AGO2Q9UKV8 859 aaKnown RBP18.44■□□□□ 0.54
UBE2D4-209ENST00000454428 TCRBV21S2A2A0A5A6 115 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 SCAMP3O14828 347 aaKnown RBP18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 OPHN1O60890 802 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 GJB3O75712 270 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 KAT7O95251 611 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 ADSSP30520 456 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 POLR2BP30876 1174 aaKnown RBP18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 DPP6P42658 865 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 POU5F1Q01860 360 aaKnown RBP18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 HSF5Q4G112 596 aaPredicted RBP18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 RHBDF2Q6PJF5 856 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 GPBP1Q86WP2 473 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 C1orf127Q8N9H9 656 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 FSIP1Q8NA03 581 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 ZSWIM2Q8NEG5 633 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 COL26A1Q96A83 441 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 ZNF560Q96MR9 790 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 PNKPQ96T60 521 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 RNF38Q9H0F5 515 aa18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 POLMQ9NP87 494 aaPredicted RBP18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 BCCIPQ9P287 314 aaKnown RBP eCLIP18.43■□□□□ 0.54
UBE2D4-209ENST00000454428 PTPRBP23467 1997 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 GABRDO14764 452 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 FAM13AO94988 1023 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 ITGB3P05106 788 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 EIF2DP41214 584 aaKnown RBP18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 GFPT1Q06210 699 aaPredicted RBP18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 EOGTQ5NDL2 527 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 LMBRD2Q68DH5 695 aaPredicted RBP18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 FAM171BQ6P995 826 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 SCN4BQ8IWT1 228 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 CEP76Q8TAP6 659 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 SPATA18Q8TC71 538 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 FUBP3Q96I24 572 aaKnown RBP eCLIP18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 BLOC1S4Q9NUP1 217 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 DNAAF2Q9NVR5 837 aaKnown RBP18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 HCN2Q9UL51 889 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 LIMCH1Q9UPQ0 1083 aa18.42■□□□□ 0.54
UBE2D4-209ENST00000454428 KALRNO60229 2985 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 VWA3AA6NCI4 1184 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 MYMKA6NI61 221 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 ARHGAP33O14559 1287 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 SH3BP5O60239 455 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 ATP2C2O75185 946 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 ZIC2O95409 532 aaPredicted RBP18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 OLFM2O95897 454 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 PNPLA4P41247 253 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 MAGEA11P43364 429 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 ATXN3P54252 364 aaPredicted RBP18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 SLC7A9P82251 487 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 CCNI2Q6ZMN8 369 aaPredicted RBP18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 NT5DC4Q86YG4 428 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 SPATA2LQ8IUW3 424 aaPredicted RBP18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 SLC41A1Q8IVJ1 513 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 TMEM86AQ8N2M4 240 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 PNPLA1Q8N8W4 532 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 ADAMTS14Q8WXS8 1223 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 CDK5RAP3Q96JB5 506 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 GDAP2Q9NXN4 497 aa18.41■□□□□ 0.54
UBE2D4-209ENST00000454428 AGAP1Q9UPQ3 857 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms