RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 STK32AQ8WU08 396 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 CPA5Q8WXQ8 436 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 HSFY1Q96LI6 401 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 KCNK16Q96T55 309 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 CDCA3Q99618 268 aaPredicted RBP15.46■□□□□ 0.07
SHANK2-210ENST00000449116 KCNF1Q9H3M0 494 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 NSUN3Q9H649 340 aaKnown RBP15.46■□□□□ 0.07
SHANK2-210ENST00000449116 TLE6Q9H808 572 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 PNPLA8Q9NP80 782 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 SPTLC3Q9NUV7 552 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 CYTH4Q9UIA0 394 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 NAGPAQ9UK23 515 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 NENFQ9UMX5 172 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 EPN1Q9Y6I3 576 aaPredicted RBP15.46■□□□□ 0.07
SHANK2-210ENST00000449116 PTPRDP23468 1912 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 CDH23Q9H251 3354 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 TMCO5BA8MYB1 307 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 EIF3CLB5ME19 914 aaKnown RBP15.45■□□□□ 0.06
SHANK2-210ENST00000449116 PRRG1O14668 218 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 SOAT2O75908 522 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 NDUFA10O95299 355 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 IPO7O95373 1038 aaKnown RBP15.45■□□□□ 0.06
SHANK2-210ENST00000449116 LCA5LO95447 670 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 SPATA31D3P0C874 917 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 NRIP1P48552 1158 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 GPR15P49685 360 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 DDR2Q16832 855 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 CCDC122Q5T0U0 273 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 LIN9Q5TKA1 542 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 ACAD10Q6JQN1 1059 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 PMF1Q6P1K2 205 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 SPATA31D4Q6ZUB0 917 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 CCDC149Q6ZUS6 474 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 MSANTD4Q8NCY6 345 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 SLC22A17Q8WUG5 538 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 HDAC7Q8WUI4 952 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 KCTD13Q8WZ19 329 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 CEP295NLQ96MC4 621 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 ZNF830Q96NB3 372 aaPredicted RBP15.45■□□□□ 0.06
SHANK2-210ENST00000449116 EIF3CQ99613 913 aaKnown RBP15.45■□□□□ 0.06
SHANK2-210ENST00000449116 SLC4A5Q9BY07 1137 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 PLEKHA4Q9H4M7 779 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 CYLDQ9NQC7 956 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 TAS2R14Q9NYV8 317 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 YIPF1Q9Y548 306 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 INSL5Q9Y5Q6 135 aa15.45■□□□□ 0.06
SHANK2-210ENST00000449116 HHLA1C9JL84 531 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 RTN2O75298 545 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 C8AP07357 584 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 ACADSBP45954 432 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 ALDH1A3P47895 512 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 RPL34P49207 117 aaKnown RBP15.44■□□□□ 0.06
SHANK2-210ENST00000449116 RGS7P49802 495 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 SNX16P57768 344 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 PLD1Q13393 1074 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 SPA17Q15506 151 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 PTPN20Q4JDL3 420 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 C10orf76Q5T2E6 689 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 GPR153Q6NV75 609 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 ELMSAN1Q6PJG2 1045 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 RTL10Q7L3V2 364 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 ERICH1Q86X53 443 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 PHF13Q86YI8 300 aaPredicted RBP15.44■□□□□ 0.06
SHANK2-210ENST00000449116 SLC7A14Q8TBB6 771 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 IPO4Q8TEX9 1081 aaKnown RBP15.44■□□□□ 0.06
SHANK2-210ENST00000449116 PPP1R13BQ96KQ4 1090 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 SPATA17Q96L03 361 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 CPXM1Q96SM3 734 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 MIS12Q9H081 205 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 ISCUQ9H1K1 167 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 LRRC4Q9HBW1 653 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 MAN1C1Q9NR34 630 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 ST7Q9NRC1 585 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 DPP7Q9UHL4 492 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 HCFC2Q9Y5Z7 792 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 ATG2AQ2TAZ0 1938 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 MYO7AQ13402 2215 aa15.44■□□□□ 0.06
SHANK2-210ENST00000449116 FAM170AA1A519 330 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 ZNF263O14978 683 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 FTLP02792 175 aaPredicted RBP15.43■□□□□ 0.06
SHANK2-210ENST00000449116 CALB1P05937 261 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 EPCAMP16422 314 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 ATF6P18850 670 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 POU3F3P20264 500 aaPredicted RBP15.43■□□□□ 0.06
SHANK2-210ENST00000449116 MMP8P22894 467 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 SLC5A3P53794 718 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
SHANK2-210ENST00000449116 TWF1Q12792 350 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 TCEAL5Q5H9L2 206 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 RAB41Q5JT25 222 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 HABP4Q5JVS0 413 aaKnown RBP15.43■□□□□ 0.06
SHANK2-210ENST00000449116 SDHAF4Q5VUM1 108 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 MMS22LQ6ZRQ5 1243 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 MON1BQ7L1V2 547 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 TMEM110Q86TL2 294 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 C11orf70Q9BRQ4 267 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 SYNCQ9H7C4 482 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 LUC7LQ9NQ29 371 aaKnown RBP15.43■□□□□ 0.06
SHANK2-210ENST00000449116 ADAM22Q9P0K1 906 aa15.43■□□□□ 0.06
SHANK2-210ENST00000449116 PLXNA3P51805 1871 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms