RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 DENND4CQ5VZ89 1909 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 OBSL1O75147 1896 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 A8MXQ7 604 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 PRR5-ARHGAP8B1AHC4 643 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 F8VP50 259 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 RETP07949 1114 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 PTPN1P18031 435 aaKnown RBP22.43■■□□□ 1.18
VSX1-206ENST00000444511 DRD1P21728 446 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 SDHBP21912 280 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 GJA4P35212 333 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 CASP4P49662 377 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 USP46P62068 366 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 ARHGAP8P85298 464 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 BIRC3Q13489 604 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 PKN3Q6P5Z2 889 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 CEP68Q76N32 757 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.43■■□□□ 1.18
VSX1-206ENST00000444511 C8orf48Q96LL4 319 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 ELOVL4Q9GZR5 314 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 ARHGAP26Q9UNA1 814 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 SLC8A2Q9UPR5 921 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 NME7Q9Y5B8 376 aa22.43■■□□□ 1.18
VSX1-206ENST00000444511 ACTN4O43707 911 aaKnown RBP22.42■■□□□ 1.18
VSX1-206ENST00000444511 EGFP01133 1207 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 GALK1P51570 392 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 SPEM2Q0P670 501 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 NR1H3Q13133 447 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 WDR5BQ86VZ2 330 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 PAGE5Q96GU1 130 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 TTLL2Q9BWV7 592 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 XYLT2Q9H1B5 865 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 DPEP3Q9H4B8 488 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 FBRSL1Q9HCM7 1045 aaKnown RBP22.42■■□□□ 1.18
VSX1-206ENST00000444511 PARD6AQ9NPB6 346 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 DMXL1Q9Y485 3027 aa22.42■■□□□ 1.18
VSX1-206ENST00000444511 KLRC4O43908 158 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 RNF40O75150 1001 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 PFKLP17858 780 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 TGM1P22735 817 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 HOXC13P31276 330 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 PPP3CCP48454 512 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 AP3M2P53677 418 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 NOP14P78316 857 aaKnown RBP22.41■■□□□ 1.18
VSX1-206ENST00000444511 STK4Q13043 487 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 PSMD2Q13200 908 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 ZNF699Q32M78 642 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 EML3Q32P44 896 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 B3GALNT2Q8NCR0 500 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 KIAA0895Q8NCT3 520 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 PLEKHO2Q8TD55 490 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 ZNF518BQ9C0D4 1074 aa22.41■■□□□ 1.18
VSX1-206ENST00000444511 CDV3Q9UKY7 258 aaKnown RBP22.41■■□□□ 1.18
VSX1-206ENST00000444511 LRRIQ3A6PVS8 624 aaPredicted RBP22.4■■□□□ 1.18
VSX1-206ENST00000444511 ABL1P00519 1130 aa22.4■■□□□ 1.18
VSX1-206ENST00000444511 TCF3P15923 654 aa22.4■■□□□ 1.18
VSX1-206ENST00000444511 PFKFB1P16118 471 aa22.4■■□□□ 1.18
VSX1-206ENST00000444511 KMT5BQ4FZB7 885 aa22.4■■□□□ 1.18
VSX1-206ENST00000444511 FBXO43Q4G163 708 aa22.4■■□□□ 1.18
VSX1-206ENST00000444511 TDRD10Q5VZ19 366 aaKnown RBP22.4■■□□□ 1.18
VSX1-206ENST00000444511 NAIF1Q69YI7 327 aaPredicted RBP22.4■■□□□ 1.18
VSX1-206ENST00000444511 PARD3BQ8TEW8 1205 aa22.4■■□□□ 1.18
VSX1-206ENST00000444511 CD101Q93033 1021 aa22.4■■□□□ 1.18
VSX1-206ENST00000444511 USP25Q9UHP3 1055 aa22.4■■□□□ 1.18
VSX1-206ENST00000444511 ZNF638Q14966 1978 aaKnown RBP22.39■■□□□ 1.18
VSX1-206ENST00000444511 A0A1B0GVL5 298 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 ZNF840PA6NDX5 716 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 CLDN5O00501 218 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 LRP3O75074 770 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 NFATC1O95644 943 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 CMA1P23946 247 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 PXNP49023 591 aaPredicted RBP22.39■■□□□ 1.17
VSX1-206ENST00000444511 CACNA2D1P54289 1103 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 IFRD2Q12894 506 aaPredicted RBP22.39■■□□□ 1.17
VSX1-206ENST00000444511 NCOA4Q13772 614 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 ZNF667Q5HYK9 610 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 SLC9A9Q8IVB4 645 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 SPATA32Q96LK8 384 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 SLITRK1Q96PX8 696 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 B3GNT5Q9BYG0 378 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 LINC00597Q9H2U6 94 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 SMYD3Q9H7B4 428 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 VRTNQ9H8Y1 702 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 DMAC2Q9NW81 257 aa22.39■■□□□ 1.17
VSX1-206ENST00000444511 ATP8B3O60423 1300 aa22.38■■□□□ 1.17
VSX1-206ENST00000444511 MED19A0JLT2 244 aaPredicted RBP22.38■■□□□ 1.17
VSX1-206ENST00000444511 LEFTY2O00292 366 aa22.38■■□□□ 1.17
VSX1-206ENST00000444511 CDH8P55286 799 aa22.38■■□□□ 1.17
VSX1-206ENST00000444511 CLDN10P78369 228 aa22.38■■□□□ 1.17
VSX1-206ENST00000444511 TAF10Q12962 218 aa22.38■■□□□ 1.17
VSX1-206ENST00000444511 SCARA5Q6ZMJ2 495 aa22.38■■□□□ 1.17
VSX1-206ENST00000444511 TMEM30AQ9NV96 361 aa22.38■■□□□ 1.17
VSX1-206ENST00000444511 CEP250Q9BV73 2442 aa22.38■■□□□ 1.17
VSX1-206ENST00000444511 CACNA1AO00555 2505 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 CCDC163A0A0D9SF12 145 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 PDXKO00764 312 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 C4BPAP04003 597 aaKnown RBP22.37■■□□□ 1.17
VSX1-206ENST00000444511 NR3C1P04150 777 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 MYL1P05976 194 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 RAP1GAPP47736 663 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 KRT85P78386 507 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms