RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SNX9Q9Y5X1 595 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 TRIP12Q14669 1992 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-218ENST00000439806 GOLGA6L7A0A1B0GV03 622 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 EXOC1LA0A1B0GW35 172 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 E5RJQ4 531 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 PIK3R2O00459 728 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 DPYSL4O14531 572 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 PRPSAP2O60256 369 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CDH16O75309 829 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CELF2O95319 508 aaKnown RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 MYL3P08590 195 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 VIMP08670 466 aaKnown RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 PDGFRAP16234 1089 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 PECAM1P16284 738 aaPredicted RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CYP3A5P20815 502 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 PSEN2P49810 448 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CDH6P55285 790 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 ARL4CP56559 192 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 PDIA2Q13087 525 aaKnown RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 IFT88Q13099 833 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 NR1H3Q13133 447 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 MAP2K5Q13163 448 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 TFDP2Q14188 446 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 TMED2Q15363 201 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 TAZQ16635 292 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 FAM47CQ5HY64 1035 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 RNASEH2BQ5TBB1 312 aaKnown RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 ACOT1Q86TX2 421 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 TAX1BP1Q86VP1 789 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 SESTD1Q86VW0 696 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 PPIL6Q8IXY8 311 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 MICALL1Q8N3F8 863 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 LRRC52Q8N7C0 313 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 ANKRD42Q8N9B4 389 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CCDC197Q8NCU1 140 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CMASQ8NFW8 434 aaPredicted RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 OR6B3Q8NGW1 331 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 MGARPQ8TDB4 240 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 PRCCQ92733 491 aaPredicted RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 SEC16BQ96JE7 1060 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CABS1Q96KC9 395 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 ZNF560Q96MR9 790 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 PRMT1Q99873 361 aaKnown RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 NCAPGQ9BPX3 1015 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 EIF2AQ9BY44 585 aaKnown RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CCDC134Q9H6E4 229 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 SAMD15Q9P1V8 674 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CTNNAL1Q9UBT7 734 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 TUBGCP4Q9UGJ1 667 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 DDX20Q9UHI6 824 aaKnown RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 CPA4Q9UI42 421 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.93□□□□□ -0.66
CPNE1-218ENST00000439806 TRPM7Q96QT4 1865 aa10.93□□□□□ -0.66
CPNE1-218ENST00000439806 TMEM120BA0PK00 339 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 C2CD4BA6NLJ0 364 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 APOC4-APOC2K7ER74 178 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 SMAPO00193 183 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 PPEF2O14830 753 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 GPR32O75388 356 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 RECQL4O94761 1208 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-218ENST00000439806 F2P00734 622 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 CD4P01730 458 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 APOC2P02655 101 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 PFKMP08237 780 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 CD48P09326 243 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 DARSP14868 501 aaKnown RBP10.92□□□□□ -0.66
CPNE1-218ENST00000439806 BRAFP15056 766 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 SDC4P31431 198 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 PHBP35232 272 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 IFNAR2P48551 515 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 CTCFP49711 727 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-218ENST00000439806 LIG3P49916 1009 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 IRX5P78411 483 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-218ENST00000439806 ROR1Q01973 937 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 IRF5Q13568 498 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 PDK2Q15119 407 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 CDO1Q16878 200 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 C15orf59Q2T9L4 293 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-218ENST00000439806 GLRA4Q5JXX5 417 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 PRAMEF19Q5SWL8 479 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 PPP1R26Q5T8A7 1209 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-218ENST00000439806 SCYL2Q6P3W7 929 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 DARS2Q6PI48 645 aaKnown RBP10.92□□□□□ -0.66
CPNE1-218ENST00000439806 YTHDF3Q7Z739 585 aaKnown RBP10.92□□□□□ -0.66
CPNE1-218ENST00000439806 TLK2Q86UE8 772 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 UNC93AQ86WB7 457 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 MAP7D3Q8IWC1 876 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 LRRC34Q8IZ02 419 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 ANKS4BQ8N8V4 417 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 P3H4Q92791 437 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 PEBP4Q96S96 227 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 AP5M1Q9H0R1 490 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 SNX25Q9H3E2 840 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 PPCSQ9HAB8 311 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 NGRNQ9NPE2 291 aaKnown RBP10.92□□□□□ -0.66
CPNE1-218ENST00000439806 FAM49BQ9NUQ9 324 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 NKIRAS1Q9NYS0 192 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 TBK1Q9UHD2 729 aa10.92□□□□□ -0.66
CPNE1-218ENST00000439806 A6NJR5 290 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms