RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MRPL45Q9BRJ2 306 aaKnown RBP15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 TTLL2Q9BWV7 592 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 GKN1Q9NS71 199 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 COMMD8Q9NX08 183 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 ZSCAN32Q9NX65 697 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 TRPM5Q9NZQ8 1165 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 SPECC1L-ADORA2AF8WAN1 911 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 STX10O60499 249 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 LRRN2O75325 713 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 SMC2O95347 1197 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 PRAMEF12O95522 483 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 CHRNB1P11230 501 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 NR2F2P24468 414 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 GPR15P49685 360 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 VAMP7P51809 220 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 PSMC1P62191 440 aaKnown RBP15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 RUNX3Q13761 415 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 COBLL1Q53SF7 1204 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 SV2AQ7L0J3 742 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 ASCL5Q7RTU5 278 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 SPEM1Q8N4L4 309 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 CCDC150Q8NCX0 1101 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 OVCA2Q8WZ82 227 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 IMPG2Q9BZV3 1241 aa15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 FAM124BQ9H5Z6 455 aaPredicted RBP15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 NDRG2Q9UN36 371 aaKnown RBP15.48■□□□□ 0.07
NIF3L1-205ENST00000409588 MIA3Q5JRA6 1907 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 KINO60870 393 aaKnown RBP15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 RTN3O95197 1032 aaPredicted RBP15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 HDCP19113 662 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 CTHP32929 405 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 CASP4P49662 377 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 CSTF1Q05048 431 aaKnown RBP15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 MTAPQ13126 283 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 NR1H3Q13133 447 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 MDH1BQ5I0G3 518 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 SDHAF4Q5VUM1 108 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 FMR1NBQ8N0W7 255 aaPredicted RBP15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 CRYBG2Q8N1P7 616 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 TTC39CQ8N584 583 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 ZBTB44Q8NCP5 570 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 PDZD8Q8NEN9 1154 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 CCDC26Q8TAB7 109 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 PLEKHO2Q8TD55 490 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 NUP210Q8TEM1 1887 aaPredicted RBP15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 SLITRK1Q96PX8 696 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 CYP3A43Q9HB55 503 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 PRMT8Q9NR22 394 aaPredicted RBP15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 GTSE1Q9NYZ3 720 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 F5P12259 2224 aa15.47■□□□□ 0.07
NIF3L1-205ENST00000409588 HCRTO43612 131 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 ATG13O75143 517 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 PAPSS2O95340 614 aaPredicted RBP15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 ASS1P00966 412 aaKnown RBP15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 CKMP06732 381 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 HOXB1P14653 301 aaPredicted RBP15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 CXCL12P48061 93 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 CDR1P51861 262 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 GPIHBP1Q8IV16 184 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 NUP93Q8N1F7 819 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 STKLD1Q8NE28 680 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 OSCP1Q8WVF1 389 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 GOLPH3LQ9H4A5 285 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 GCNT4Q9P109 453 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 ARHGAP26Q9UNA1 814 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 MYO15AQ9UKN7 3530 aa15.46■□□□□ 0.07
NIF3L1-205ENST00000409588 NCANO14594 1321 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 F8VP50 259 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 TRDMT1O14717 391 aaKnown RBP15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 CETN3O15182 167 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 AKAP3O75969 853 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 VNN1O95497 513 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 HOXA6P31267 233 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 CNR2P34972 360 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 PPP1R2P41236 205 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 DLG4P78352 724 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 GRSF1Q12849 480 aaKnown RBP eCLIP15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 ZNF658Q5TYW1 1059 aaPredicted RBP15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 FAM186BQ8IYM0 893 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 ADSSL1Q8N142 457 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 GPR161Q8N6U8 529 aaKnown RBP15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 ENGASEQ8NFI3 743 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 SPATA20Q8TB22 786 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 ATP2A3Q93084 1043 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 SMARCD1Q96GM5 515 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 ZFYVE19Q96K21 471 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 B3GNT5Q9BYG0 378 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 TRPC7Q9HCX4 862 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 CCL26Q9Y258 94 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 CACNA1IQ9P0X4 2223 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 VPS13AQ96RL7 3174 aa15.45■□□□□ 0.06
NIF3L1-205ENST00000409588 ZNF840PA6NDX5 716 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 SLC9A3R1O14745 358 aaPredicted RBP15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 LILRB5O75023 590 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 TADA3O75528 432 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 CLSTN1O94985 981 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 DRD1P21728 446 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 YWHAQP27348 245 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 CDH8P55286 799 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 SLC7A9P82251 487 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms