RNA–Protein interactions for RNA: ENST00000369128.9

VPS45-201, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2 BASIC

Gene VPS45, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-201ENST00000369128 PCED1BQ96HM7 432 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 PEBP4Q96S96 227 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 HNRNPABQ99729 332 aaKnown RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 SYT15Q9BQS2 421 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 TRIM51Q9BSJ1 452 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 FTHL17Q9BXU8 183 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 PPP1R12CQ9BZL4 782 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 MIS12Q9H081 205 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 ARFGAP3Q9NP61 516 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 GDF3Q9NR23 364 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 KRT82Q9NSB4 513 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 R3HDM2Q9Y2K5 976 aaKnown RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 BHMG1C9JSJ3 638 aaPredicted RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 M0QZQ0 153 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 ENPP3O14638 875 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 FSCN2O14926 492 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 ODC1P11926 461 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 TFE3P19532 575 aaPredicted RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 ECHS1P30084 290 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 PLA2G4AP47712 749 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 CARSP49589 748 aaKnown RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 NOMO2Q5JPE7 1267 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 MFSD7Q6UXD7 560 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 CCNI2Q6ZMN8 369 aaPredicted RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 CCDC50Q8IVM0 306 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 COLGALT2Q8IYK4 626 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 CRIPAKQ8N1N5 446 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 TMEM86AQ8N2M4 240 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 STK32AQ8WU08 396 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 RXFP2Q8WXD0 754 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 CASKIN2Q8WXE0 1202 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 ATG4AQ8WYN0 398 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 NDRG1Q92597 394 aaKnown RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 RNF25Q96BH1 459 aaPredicted RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 VWCEQ96DN2 955 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 CFAP57Q96MR6 1250 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 TMEM209Q96SK2 561 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 NAP1L3Q99457 506 aaPredicted RBP9.5□□□□□ -0.89
VPS45-201ENST00000369128 HEMGNQ9BXL5 484 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 FUT8Q9BYC5 575 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 HIPK3Q9H422 1215 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 SLITRK6Q9H5Y7 841 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 EPB41L5Q9HCM4 733 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 TMEM161AQ9NX61 479 aa9.5□□□□□ -0.89
VPS45-201ENST00000369128 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.5□□□□□ -0.89
VPS45-201ENST00000369128 LTBP2Q14767 1821 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 XPO1O14980 1071 aaKnown RBP9.49□□□□□ -0.89
VPS45-201ENST00000369128 PHF2O75151 1096 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 KRT1P04264 644 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 CYP11A1P05108 521 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 COL6A1P12109 1028 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 KRT10P13645 584 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 LCP1P13796 627 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 NPR3P17342 541 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 CYP2C18P33260 490 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 LHX1P48742 406 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 ZNF143P52747 638 aaPredicted RBP9.49□□□□□ -0.89
VPS45-201ENST00000369128 SLC6A3Q01959 620 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 TLE2Q04725 743 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 ADIGQ0VDE8 80 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 CYP1B1Q16678 543 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 CDO1Q16878 200 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 LRRC38Q5VT99 294 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 CCDC70Q6NSX1 233 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 GPRIN1Q7Z2K8 1008 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 CTU1Q7Z7A3 348 aaKnown RBP9.49□□□□□ -0.89
VPS45-201ENST00000369128 FAM35AQ86V20 835 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 DDX42Q86XP3 938 aaKnown RBP eCLIP9.49□□□□□ -0.89
VPS45-201ENST00000369128 ZMIZ2Q8NF64 920 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 EXD1Q8NHP7 514 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 AENQ8WTP8 325 aaKnown RBP9.49□□□□□ -0.89
VPS45-201ENST00000369128 UBE2Q2Q8WVN8 375 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 ZBTB9Q96C00 473 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 SLITRK1Q96PX8 696 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 PKMYT1Q99640 499 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 FAM118BQ9BPY3 351 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 DUSP16Q9BY84 665 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 SEZ6LQ9BYH1 1024 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 CHST7Q9NS84 486 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 TMLHEQ9NVH6 421 aa9.49□□□□□ -0.89
VPS45-201ENST00000369128 PRG3Q9Y2Y8 225 aaPredicted RBP9.49□□□□□ -0.89
VPS45-201ENST00000369128 MYO16Q9Y6X6 1858 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 GOLGA6L10A0A0M3HER8 536 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 C3orf70A6NLC5 250 aaPredicted RBP9.48□□□□□ -0.89
VPS45-201ENST00000369128 TUBBP07437 444 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 CD48P09326 243 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 FAM163BP0C2L3 166 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 PDGFRAP16234 1089 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 GPD1P21695 349 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 TNFRSF8P28908 595 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 MIPP30301 263 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 KCNJ1P48048 391 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 ATP11AP98196 1134 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 PLCB3Q01970 1234 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 ADCY1Q08828 1119 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 CCDC14Q49A88 953 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 LRRTM3Q86VH5 581 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 DNAJC5GQ8N7S2 189 aa9.48□□□□□ -0.89
VPS45-201ENST00000369128 C1orf54Q8WWF1 131 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms