RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 UBE2TQ9NPD8 197 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF12A-202ENST00000341627 APEX2Q9UBZ4 518 aa16.35■□□□□ 0.21
TNFRSF12A-202ENST00000341627 ZMYM5Q9UJ78 669 aa16.35■□□□□ 0.21
TNFRSF12A-202ENST00000341627 KIAA1257Q9ULG3 409 aa16.35■□□□□ 0.21
TNFRSF12A-202ENST00000341627 HCN4Q9Y3Q4 1203 aa16.35■□□□□ 0.21
TNFRSF12A-202ENST00000341627 PCDHB4Q9Y5E5 795 aa16.35■□□□□ 0.21
TNFRSF12A-202ENST00000341627 MUC6Q6W4X9 2439 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 BECN2A8MW95 431 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 MOSPD3O75425 235 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 CAVIN2O95810 425 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 GJA1P17302 382 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 SLC9A1P19634 815 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 PON1P27169 355 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 MFAP3P55082 362 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 HTR4Q13639 388 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 TEAD2Q15562 447 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 FKBP15Q5T1M5 1219 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 TMEM270Q6UE05 265 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 GAREM2Q75VX8 874 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 FBXL6Q8N531 539 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 STKLD1Q8NE28 680 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 ST13P5Q8NFI4 369 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 KAT5Q92993 513 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 VPS16Q9H269 839 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 IL21Q9HBE4 155 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 DOCK8Q8NF50 2099 aa16.34■□□□□ 0.21
TNFRSF12A-202ENST00000341627 PTPRDP23468 1912 aa16.33■□□□□ 0.21
TNFRSF12A-202ENST00000341627 NARSO43776 548 aaKnown RBP16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 RTN3O95197 1032 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 PAEPP09466 180 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 CD19P15391 556 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ZNF18P17022 549 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ACO1P21399 889 aaKnown RBP16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 CACNA2D1P54289 1103 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 SLC8A3P57103 927 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 SGO2Q562F6 1265 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 PPP1R26Q5T8A7 1209 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 NUP93Q8N1F7 819 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 MRPS31Q92665 395 aaKnown RBP16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 KREMEN1Q96MU8 473 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 KCNK16Q96T55 309 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 RPP25Q9BUL9 199 aaKnown RBP16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 CSNK1G1Q9HCP0 422 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 LIMA1Q9UHB6 759 aaKnown RBP16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 DUSP12Q9UNI6 340 aa16.33■□□□□ 0.2
TNFRSF12A-202ENST00000341627 NRG2O14511 850 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 F11P03951 625 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 VDRP11473 427 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 KRT5P13647 590 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 NPR3P17342 541 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 DDX6P26196 483 aaKnown RBP eCLIP16.32■□□□□ 0.25e-6■■■■■ 34.8
TNFRSF12A-202ENST00000341627 COPB1P53618 953 aaKnown RBP16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 MAP3K7CLP57077 242 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 TPM4P67936 248 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 GPR158Q5T848 1215 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 SMYD5Q6GMV2 418 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 PARM1Q6UWI2 310 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 DHX40Q8IX18 779 aaKnown RBP16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 RBBP8NLQ8NC74 664 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 FGF14Q92915 247 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 SMARCD2Q92925 531 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 SLITRK1Q96PX8 696 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 SMOQ99835 787 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 TTLL2Q9BWV7 592 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 DUSP16Q9BY84 665 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 TASP1Q9H6P5 420 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 MYO10Q9HD67 2058 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 TMEM30AQ9NV96 361 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 COMMD8Q9NX08 183 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 HESX1Q9UBX0 185 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 NUMBLQ9Y6R0 609 aa16.32■□□□□ 0.2
TNFRSF12A-202ENST00000341627 SOBPA7XYQ1 873 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 PPP3CCP48454 512 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 VCPP55072 806 aaKnown RBP16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 CYP4F8P98187 520 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 IER5LQ5T953 404 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 CLEC20AQ6ZU45 233 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ZMIZ2Q8NF64 920 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ZSCAN18Q8TBC5 510 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ASB16Q96NS5 453 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 FBXO44Q9H4M3 255 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ZFP14Q9HCL3 533 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 PNPLA8Q9NP80 782 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 CNTN6Q9UQ52 1028 aa16.31■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ZNF318Q5VUA4 2279 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 LRRC10BA6NIK2 292 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 LGALS16A8MUM7 142 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ECI2O75521 394 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 BEST1O76090 585 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 RFX1P22670 979 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 YWHAQP27348 245 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ZNF132P52740 706 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 SLC5A3P53794 718 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 USP46P62068 366 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 KCNMA1Q12791 1236 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 IFRD2Q12894 506 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 STILQ15468 1287 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 ARHGAP44Q17R89 818 aa16.3■□□□□ 0.2
TNFRSF12A-202ENST00000341627 GOLGA7BQ2TAP0 167 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms