RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 XPO1O14980 1071 aaKnown RBP18.26■□□□□ 0.51
CLDN4-201ENST00000340958 DGKIO75912 1065 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 FGBP02675 491 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 PSMA2P25787 234 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 PBX3P40426 434 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 MAP3K7CLP57077 242 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 LRIT3Q3SXY7 679 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 ZFYVE27Q5T4F4 411 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 FAM35AQ86V20 835 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 CREG2Q8IUH2 290 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 SCUBE3Q8IX30 993 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 UBXN4Q92575 508 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 GOLGA1Q92805 767 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 TOP1MTQ969P6 601 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 MYLPFQ96A32 169 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 MS4A14Q96JA4 679 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 LRRC4Q9HBW1 653 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 CXXC1Q9P0U4 656 aaPredicted RBP18.26■□□□□ 0.51
CLDN4-201ENST00000340958 EFCAB8A8MWE9 144 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 SYN3O14994 580 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 GALTP07902 379 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 DESP17661 470 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 RFC1P35251 1148 aaPredicted RBP18.25■□□□□ 0.51
CLDN4-201ENST00000340958 GSCP56915 257 aaPredicted RBP18.25■□□□□ 0.51
CLDN4-201ENST00000340958 ELAVL2Q12926 359 aaKnown RBP18.25■□□□□ 0.51
CLDN4-201ENST00000340958 PIGHQ14442 188 aaPredicted RBP18.25■□□□□ 0.51
CLDN4-201ENST00000340958 TMEM110Q86TL2 294 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 ZDHHC17Q8IUH5 632 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 LRRN4CLQ8ND94 238 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 HERVK_113Q902F9 699 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 MCRS1Q96EZ8 462 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 SMARCD1Q96GM5 515 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 HSFY1Q96LI6 401 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 RTP3Q9BQQ7 232 aa18.25■□□□□ 0.51
CLDN4-201ENST00000340958 GBF1Q92538 1859 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 TCRBV5S1A1TA0A578 114 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 CES2O00748 559 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 BAIAP3O94812 1187 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 GJC1P36383 396 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 PLA2G4AP47712 749 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 WDR5P61964 334 aaKnown RBP18.24■□□□□ 0.51
CLDN4-201ENST00000340958 DEFB103AP81534 67 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 PPP1R15BQ5SWA1 713 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 TEX35Q5T0J7 233 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 RASIP1Q5U651 963 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 FUT10Q6P4F1 479 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 TMCO2Q7Z6W1 182 aaPredicted RBP18.24■□□□□ 0.51
CLDN4-201ENST00000340958 PIGZQ86VD9 579 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 SPATA2LQ8IUW3 424 aaPredicted RBP18.24■□□□□ 0.51
CLDN4-201ENST00000340958 DCP1BQ8IZD4 617 aaKnown RBP18.24■□□□□ 0.51
CLDN4-201ENST00000340958 SIX6OS1Q8N1H7 587 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 EMC1Q8N766 993 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 OR10T2Q8NGX3 314 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 RPGRIP1Q96KN7 1286 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 PTPRSQ13332 1948 aa18.24■□□□□ 0.51
CLDN4-201ENST00000340958 DDX3YO15523 660 aaKnown RBP18.23■□□□□ 0.51
CLDN4-201ENST00000340958 GRAP2O75791 330 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 RWDD2BP57060 319 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 SLC6A3Q01959 620 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 CTXN3Q4LDR2 81 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 ODF2Q5BJF6 829 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 VARS2Q5ST30 1063 aaKnown RBP18.23■□□□□ 0.51
CLDN4-201ENST00000340958 SEL1L2Q5TEA6 688 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 C4orf50Q6ZRC1 276 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 CLEC20AQ6ZU45 233 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 CPNE8Q86YQ8 564 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 JOSD2Q8TAC2 188 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 KRT35Q92764 455 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 YME1L1Q96TA2 773 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 PLVAPQ9BX97 442 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 CYLDQ9NQC7 956 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 MICAL3Q7RTP6 2002 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 OAZ2O95190 189 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 CTNNA2P26232 953 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 MAN1A1P33908 653 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 CTNNA1P35221 906 aaKnown RBP18.23■□□□□ 0.51
CLDN4-201ENST00000340958 GTF2F1P35269 517 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLDN4-201ENST00000340958 RBM10P98175 930 aaKnown RBP18.23■□□□□ 0.51
CLDN4-201ENST00000340958 ZNF211Q13398 564 aaPredicted RBP18.23■□□□□ 0.51
CLDN4-201ENST00000340958 BTG3Q14201 252 aaPredicted RBP18.23■□□□□ 0.51
CLDN4-201ENST00000340958 SLC39A12Q504Y0 691 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 FAM171BQ6P995 826 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 PAQR9Q6ZVX9 377 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 RHOT1Q8IXI2 618 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 LRCH3Q96II8 777 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 TMEM209Q96SK2 561 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 GPR62Q9BZJ7 368 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 MARCH5Q9NX47 278 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 SMARCAL1Q9NZC9 954 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 EHD2Q9NZN4 543 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 PCDHA3Q9Y5H8 950 aa18.23■□□□□ 0.51
CLDN4-201ENST00000340958 TADA3O75528 432 aa18.22■□□□□ 0.51
CLDN4-201ENST00000340958 BEST1O76090 585 aa18.22■□□□□ 0.51
CLDN4-201ENST00000340958 BDNFP23560 247 aa18.22■□□□□ 0.51
CLDN4-201ENST00000340958 ARPP19P56211 112 aa18.22■□□□□ 0.51
CLDN4-201ENST00000340958 TUBB4BP68371 445 aa18.22■□□□□ 0.51
CLDN4-201ENST00000340958 ADIGQ0VDE8 80 aa18.22■□□□□ 0.51
CLDN4-201ENST00000340958 DAB2IPQ5VWQ8 1189 aa18.22■□□□□ 0.51
CLDN4-201ENST00000340958 FAM109BQ6ICB4 259 aaPredicted RBP18.22■□□□□ 0.51
CLDN4-201ENST00000340958 ZNF280DQ6N043 979 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms