RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 TRIM49P0CI25 452 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 TRIM49CP0CI26 452 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 ARSAP15289 507 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 NR2F2P24468 414 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 GRIK1P39086 918 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 ASPAP45381 313 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 AP3M2P53677 418 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 NOP14P78316 857 aaKnown RBP18.17■□□□□ 0.5
BRCC3-202ENST00000340647 CSTF1Q05048 431 aaKnown RBP18.17■□□□□ 0.5
BRCC3-202ENST00000340647 BIRC3Q13489 604 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 MAPRE1Q15691 268 aaKnown RBP18.17■□□□□ 0.5
BRCC3-202ENST00000340647 ZNF699Q32M78 642 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 NAIF1Q69YI7 327 aaPredicted RBP18.17■□□□□ 0.5
BRCC3-202ENST00000340647 SCARA5Q6ZMJ2 495 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 Q6ZS52 159 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 ARL14EPQ8N8R7 260 aaPredicted RBP18.17■□□□□ 0.5
BRCC3-202ENST00000340647 ZBTB44Q8NCP5 570 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 SPATA20Q8TB22 786 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 CSGALNACT1Q8TDX6 532 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 MRPS31Q92665 395 aaKnown RBP18.17■□□□□ 0.5
BRCC3-202ENST00000340647 KCNK16Q96T55 309 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 RNF38Q9H0F5 515 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 EBF3Q9H4W6 596 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 C8orf33Q9H7E9 229 aaPredicted RBP18.17■□□□□ 0.5
BRCC3-202ENST00000340647 FBRSL1Q9HCM7 1045 aaKnown RBP18.17■□□□□ 0.5
BRCC3-202ENST00000340647 UXTQ9UBK9 157 aaPredicted RBP18.17■□□□□ 0.5
BRCC3-202ENST00000340647 NCAM2O15394 837 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 LAMTOR5O43504 91 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 CALUO43852 315 aaPredicted RBP18.16■□□□□ 0.5
BRCC3-202ENST00000340647 LILRB5O75023 590 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 PHACTR2O75167 634 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 HLA-DRAP01903 254 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 AVPR1AP37288 418 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 USP4Q13107 963 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 ORC1Q13415 861 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 CCINQ13939 588 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 ZNF667Q5HYK9 610 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 DENND5BQ6ZUT9 1274 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 RALGPS2Q86X27 583 aaPredicted RBP18.16■□□□□ 0.5
BRCC3-202ENST00000340647 FUKQ8N0W3 1084 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 ZMIZ2Q8NF64 920 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 TAS1R2Q8TE23 839 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 EEF2KMTQ96G04 330 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 CEP295NLQ96MC4 621 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 TWNKQ96RR1 684 aa18.16■□□□□ 0.5
BRCC3-202ENST00000340647 ZNF840PA6NDX5 716 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 TNFRSF10BO14763 440 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 BEST1O76090 585 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 OLFM2O95897 454 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 PRCPP42785 496 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 GCLMP48507 274 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 PGFP49763 221 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 VAMP7P51809 220 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 KPNA1P52294 538 aaPredicted RBP18.15■□□□□ 0.5
BRCC3-202ENST00000340647 PMS1P54277 932 aaKnown RBP18.15■□□□□ 0.5
BRCC3-202ENST00000340647 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 SATB1Q01826 763 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 FAM160A1Q05DH4 1040 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 RUNX3Q13761 415 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 PON2Q15165 354 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 PKN3Q6P5Z2 889 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 EZH1Q92800 747 aaPredicted RBP18.15■□□□□ 0.5
BRCC3-202ENST00000340647 KIF9Q9HAQ2 790 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 TRPC7Q9HCX4 862 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■■■ 96.1
BRCC3-202ENST00000340647 IL37Q9NZH6 218 aa18.15■□□□□ 0.5
BRCC3-202ENST00000340647 DMWDQ09019 674 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 ADAM9Q13443 819 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 SGSM1Q2NKQ1 1148 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 GAB4Q2WGN9 574 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 ITPRIPL2Q3MIP1 535 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 FSTL4Q6MZW2 842 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 ACOT1Q86TX2 421 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 ZC3H3Q8IXZ2 948 aaKnown RBP18.14■□□□□ 0.49
BRCC3-202ENST00000340647 CRYBG2Q8N1P7 616 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 WHAMMQ8TF30 809 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 SEMA4DQ92854 862 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 MSANTD3Q96H12 275 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 ELOVL4Q9GZR5 314 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 LINC00597Q9H2U6 94 aa18.14■□□□□ 0.49
BRCC3-202ENST00000340647 TRAV19A0A0A6YYK7 116 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 K7ESF4 209 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 TRIM66O15016 1216 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 OAS1P00973 400 aaKnown RBP18.13■□□□□ 0.49
BRCC3-202ENST00000340647 LMNAP02545 664 aaKnown RBP18.13■□□□□ 0.49
BRCC3-202ENST00000340647 TCF3P15923 654 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 NDST1P52848 882 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 NUCB2P80303 420 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 ENPEPQ07075 957 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 TAF10Q12962 218 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 BECN1Q14457 450 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 MTF1Q14872 753 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 EML3Q32P44 896 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 TMEM196Q5HYL7 178 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 FAM35AQ86V20 835 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 FAM186BQ8IYM0 893 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 C12orf29Q8N999 325 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 SCAMP5Q8TAC9 235 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 SMOQ99835 787 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 SEMA4AQ9H3S1 761 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms