RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 FBRSL1Q9HCM7 1045 aaKnown RBP20.74■□□□□ 0.91
ITGA4-202ENST00000339307 SERTAD1Q9UHV2 236 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 FRYLO94915 3013 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 PTPN1P18031 435 aaKnown RBP20.73■□□□□ 0.91
ITGA4-202ENST00000339307 CASP4P49662 377 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 USP46P62068 366 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 NR1H3Q13133 447 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 PKP1Q13835 747 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 ZNF77Q15935 545 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 NAIF1Q69YI7 327 aaPredicted RBP20.73■□□□□ 0.91
ITGA4-202ENST00000339307 ZNF516Q92618 1163 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 DPEP3Q9H4B8 488 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 EXOC1Q9NV70 894 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 EHD2Q9NZN4 543 aa20.73■□□□□ 0.91
ITGA4-202ENST00000339307 CGNQ9P2M7 1197 aaKnown RBP20.73■□□□□ 0.91
ITGA4-202ENST00000339307 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.73■□□□□ 0.91
ITGA4-202ENST00000339307 DCHS1Q96JQ0 3298 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 F8VP50 259 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 TACC1O75410 805 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 CCDC192P0DO97 292 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 DRD1P21728 446 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 PDE6CP51160 858 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 EHHADHQ08426 723 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 ATL3Q6DD88 541 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 WDR5BQ86VZ2 330 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 SYAP1Q96A49 352 aaPredicted RBP20.72■□□□□ 0.91
ITGA4-202ENST00000339307 LINC00597Q9H2U6 94 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 POLR3BQ9NW08 1133 aaPredicted RBP20.72■□□□□ 0.91
ITGA4-202ENST00000339307 GCNT4Q9P109 453 aa20.72■□□□□ 0.91
ITGA4-202ENST00000339307 CLDN5O00501 218 aa20.71■□□□□ 0.91
ITGA4-202ENST00000339307 ATXN1P54253 815 aaKnown RBP20.71■□□□□ 0.91
ITGA4-202ENST00000339307 USP4Q13107 963 aa20.71■□□□□ 0.91
ITGA4-202ENST00000339307 TDRD10Q5VZ19 366 aaKnown RBP20.71■□□□□ 0.91
ITGA4-202ENST00000339307 FAM160A2Q8N612 972 aaPredicted RBP20.71■□□□□ 0.91
ITGA4-202ENST00000339307 CD101Q93033 1021 aa20.71■□□□□ 0.91
ITGA4-202ENST00000339307 MED10Q9BTT4 135 aa20.71■□□□□ 0.91
ITGA4-202ENST00000339307 ATG2BQ96BY7 2078 aa20.7■□□□□ 0.91
ITGA4-202ENST00000339307 AXIN1O15169 862 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 TGM1P22735 817 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 ATICP31939 592 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 BMT2Q1RMZ1 405 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 ZNF699Q32M78 642 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 EML3Q32P44 896 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 SCARA5Q6ZMJ2 495 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 RPLP0P6Q8NHW5 317 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 GOLGA5Q8TBA6 731 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 ELMO3Q96BJ8 720 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 ZNF518BQ9C0D4 1074 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 SEMA4GQ9NTN9 838 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 SMPD4Q9NXE4 827 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 ARHGAP26Q9UNA1 814 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 NME7Q9Y5B8 376 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 DMXL1Q9Y485 3027 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.7■□□□□ 0.9
ITGA4-202ENST00000339307 DCDC2BA2VCK2 349 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 LEFTY2O00292 366 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 RPP40O75818 363 aaKnown RBP20.7■□□□□ 0.9
ITGA4-202ENST00000339307 SLFN14P0C7P3 912 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 RAP1GAPP47736 663 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 CDH8P55286 799 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 TAF10Q12962 218 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 C12orf56Q8IXR9 622 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 B3GALNT2Q8NCR0 500 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 PAGE5Q96GU1 130 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 C8orf48Q96LL4 319 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 CEP295NLQ96MC4 621 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 SLITRK1Q96PX8 696 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 HHIPQ96QV1 700 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 ELOVL4Q9GZR5 314 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 RCOR1Q9UKL0 485 aa20.7■□□□□ 0.9
ITGA4-202ENST00000339307 A0A1B0GVL5 298 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 ZNF840PA6NDX5 716 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 SCAMP3O14828 347 aaKnown RBP20.69■□□□□ 0.9
ITGA4-202ENST00000339307 NFATC1O95644 943 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 FAM163BP0C2L3 166 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 HOXA6P31267 233 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 CACNA2D1P54289 1103 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 STK4Q13043 487 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 KMT5BQ4FZB7 885 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 FBXO43Q4G163 708 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 ZNF667Q5HYK9 610 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 B3GNT5Q9BYG0 378 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 SMYD3Q9H7B4 428 aa20.69■□□□□ 0.9
ITGA4-202ENST00000339307 ATP8B3O60423 1300 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 LRRIQ3A6PVS8 624 aaPredicted RBP20.68■□□□□ 0.9
ITGA4-202ENST00000339307 PPP3CCP48454 512 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 SEC13P55735 322 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 NOP14P78316 857 aaKnown RBP20.68■□□□□ 0.9
ITGA4-202ENST00000339307 NCOA4Q13772 614 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 CACNA2D4Q7Z3S7 1137 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 PLEKHO2Q8TD55 490 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 GAB3Q8WWW8 586 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 RTKNQ9BST9 563 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 RNF38Q9H0F5 515 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 GZF1Q9H116 711 aaPredicted RBP20.68■□□□□ 0.9
ITGA4-202ENST00000339307 XYLT2Q9H1B5 865 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 CPQQ9Y646 472 aa20.68■□□□□ 0.9
ITGA4-202ENST00000339307 GREB1Q4ZG55 1949 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 ANAPC1Q9H1A4 1944 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 ACTN4O43707 911 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms