RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 TTC7BQ86TV6 843 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 CCDC84Q86UT8 332 aaPredicted RBP8.96□□□□□ -0.98
TDP1-201ENST00000335725 LRRTM3Q86VH5 581 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 SRRM1Q8IYB3 904 aaKnown RBP8.96□□□□□ -0.98
TDP1-201ENST00000335725 LRRC59Q96AG4 307 aaKnown RBP8.96□□□□□ -0.98
TDP1-201ENST00000335725 TTC25Q96NG3 672 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 MLXIPLQ9NP71 852 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 MAST3O60307 1309 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 GPATCH8Q9UKJ3 1502 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 GTPBP10A4D1E9 387 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 C16orf96A6NNT2 1141 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 CAPN14A8MX76 684 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 C19orf81C9J6K1 198 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 GIPC1O14908 333 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 RIPK2O43353 540 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 USP1O94782 785 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 ATF4P18848 351 aaPredicted RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 NAMPTP43490 491 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 SSTP61278 116 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 CD83Q01151 205 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 SNAPC2Q13487 334 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 TRPC3Q13507 836 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 LETM2Q2VYF4 491 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 IQSEC1Q6DN90 963 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 FBXL19Q6PCT2 694 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 GRAMD1CQ8IYS0 662 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 SRBD1Q8N5C6 995 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 PDPRQ8NCN5 879 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 PYM1Q9BRP8 204 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 TXNDC16Q9P2K2 825 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.95□□□□□ -0.98
TDP1-201ENST00000335725 HEMK1Q9Y5R4 338 aaPredicted RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 HNRNPCL2B2RXH8 293 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 F6X3S4 739 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 KCNA6P17658 529 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 MUTP22033 750 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 LRPAP1P30533 357 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 TSPAN7P41732 249 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 BMXP51813 675 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 COASYQ13057 564 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 OASLQ15646 514 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 ATAD3BQ5T9A4 648 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 TTC27Q6P3X3 843 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 DBX2Q6ZNG2 339 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 EEPD1Q7L9B9 569 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 ANKRD13CQ8N6S4 541 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 SLC4A11Q8NBS3 891 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 SNX18Q96RF0 628 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 TMEM79Q9BSE2 394 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 DCUN1D5Q9BTE7 237 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 DPEP3Q9H4B8 488 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 IGSF5Q9NSI5 407 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 ARL8BQ9NVJ2 186 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 DBNLQ9UJU6 430 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 APPL1Q9UKG1 709 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 CAB39Q9Y376 341 aaPredicted RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 MAGI1Q96QZ7 1491 aaPredicted RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 MYH11P35749 1972 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 FAM47DPA6NHR8 397 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 MSI1O43347 362 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 NDUFA2O43678 99 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 RETP07949 1114 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 SERPINB1P30740 379 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 GRIK1P39086 918 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 BTDP43251 543 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 EXOSC10Q01780 885 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 DHX34Q14147 1143 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 POU6F1Q14863 301 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 PLA2G4EQ3MJ16 856 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 FANK1Q8TC84 345 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 ISOC1Q96CN7 298 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 TXNDC15Q96J42 360 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 GCNAQ96QF7 691 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 AP1M1Q9BXS5 423 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 USP44Q9H0E7 712 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 ZDHHC18Q9NUE0 388 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 CPSF3Q9UKF6 684 aaKnown RBP8.95□□□□□ -0.98
TDP1-201ENST00000335725 PCDHGA10Q9Y5H3 936 aa8.95□□□□□ -0.98
TDP1-201ENST00000335725 A0A1W2PRG0 241 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 TRIM77I1YAP6 450 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 TRDMT1O14717 391 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 ECDO95905 644 aaPredicted RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 CD4P01730 458 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 DBTP11182 482 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 GZMAP12544 262 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 HSPA6P17066 643 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 CEBPAP49715 358 aaPredicted RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 RGS7P49802 495 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 CYP4F2P78329 520 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 MYBPC1Q00872 1141 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 CYP4F3Q08477 520 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 DUSP7Q16829 419 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 FAM26DQ5JW98 314 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 PXDC1Q5TGL8 231 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 LPCAT4Q643R3 524 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 SLC2A14Q8TDB8 520 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 PANX3Q96QZ0 392 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 TRIM31Q9BZY9 425 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms