RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 USP37Q86T82 979 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 RSPH3Q86UC2 560 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 ZC3H18Q86VM9 953 aaKnown RBP10.84□□□□□ -0.67
ABCF1-201ENST00000326195 KBTBD2Q8IY47 623 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 SPOCK2Q92563 424 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 GATA6Q92908 595 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 SLC35C1Q96A29 364 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 TRAPPC9Q96Q05 1148 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 EIF2AQ9BY44 585 aaKnown RBP10.84□□□□□ -0.67
ABCF1-201ENST00000326195 INTS2Q9H0H0 1204 aaKnown RBP10.84□□□□□ -0.67
ABCF1-201ENST00000326195 VCXQ9H320 206 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 DMAP1Q9NPF5 467 aaPredicted RBP10.84□□□□□ -0.67
ABCF1-201ENST00000326195 GRHL1Q9NZI5 618 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 SEL1LQ9UBV2 794 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 ZNF510Q9Y2H8 683 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 TGFB1I1O43294 461 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 ARF4P18085 180 aaPredicted RBP10.84□□□□□ -0.67
ABCF1-201ENST00000326195 EIF4BP23588 611 aaKnown RBP10.84□□□□□ -0.67
ABCF1-201ENST00000326195 ABCD1P33897 745 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 SLC26A2P50443 739 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 GPC3P51654 580 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 USP46P62068 366 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 DR1Q01658 176 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 ACBD5Q5T8D3 534 aaPredicted RBP10.84□□□□□ -0.67
ABCF1-201ENST00000326195 SCARA3Q6AZY7 606 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 DSTYKQ6XUX3 929 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 TNS4Q8IZW8 715 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 SLC35G2Q8TBE7 412 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 RFFLQ8WZ73 363 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 PTPRN2Q92932 1015 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 RAB3IPQ96QF0 476 aaPredicted RBP10.84□□□□□ -0.67
ABCF1-201ENST00000326195 TGS1Q96RS0 853 aaKnown RBP10.84□□□□□ -0.67
ABCF1-201ENST00000326195 PI4K2AQ9BTU6 479 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 STK33Q9BYT3 514 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 TRIM7Q9C029 511 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 LRMDAQ9H2I8 198 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 RNF39Q9H2S5 420 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 HIPK3Q9H422 1215 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 OSGEPQ9NPF4 335 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 ETNK2Q9NVF9 386 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 ST3GAL5Q9UNP4 418 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 LCTP09848 1927 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 PLXNA1Q9UIW2 1896 aa10.84□□□□□ -0.67
ABCF1-201ENST00000326195 RRN3P2A6NIE6 340 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 O00370 1275 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 TJP3O95049 919 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 PBX3P40426 434 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 RPL21P46778 160 aaKnown RBP10.83□□□□□ -0.67
ABCF1-201ENST00000326195 CALCOCO2Q13137 446 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 DYNC1I2Q13409 638 aaKnown RBP10.83□□□□□ -0.67
ABCF1-201ENST00000326195 MXD4Q14582 209 aaPredicted RBP10.83□□□□□ -0.67
ABCF1-201ENST00000326195 PARP6Q2NL67 630 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 ATF7IP2Q5U623 682 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 SNX30Q5VWJ9 437 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 FOXR2Q6PJQ5 311 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 NT5DC3Q86UY8 548 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 ARHGEF2Q92974 986 aaKnown RBP10.83□□□□□ -0.67
ABCF1-201ENST00000326195 C18orf8Q96DM3 657 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 FNBP1Q96RU3 617 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 AGPAT3Q9NRZ7 376 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 SNTG2Q9NY99 539 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 HSPBP1Q9NZL4 362 aa10.83□□□□□ -0.67
ABCF1-201ENST00000326195 E7ENQ6 273 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 RIPK2O43353 540 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 LYPLA2O95372 231 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 CXCL8P10145 99 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 FUT4P22083 530 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 GJC1P36383 396 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 MXI1P50539 228 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 AFF1P51825 1210 aaKnown RBP10.83□□□□□ -0.68
ABCF1-201ENST00000326195 PPP2R5EQ16537 467 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 LRRC26Q2I0M4 334 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 TSNAXIP1Q2TAA8 658 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 DNAJC14Q6Y2X3 702 aaPredicted RBP10.83□□□□□ -0.68
ABCF1-201ENST00000326195 TAS1R3Q7RTX0 852 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 VSIG1Q86XK7 387 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 CYP4X1Q8N118 509 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 KLHDC9Q8NEP7 349 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 DTX3LQ8TDB6 740 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 CKAP2Q8WWK9 683 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 ZFP42Q96MM3 310 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 NXF3Q9H4D5 531 aaKnown RBP10.83□□□□□ -0.68
ABCF1-201ENST00000326195 IFT122Q9HBG6 1241 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 KLHL14Q9P2G3 628 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 ATXN10Q9UBB4 475 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 AGO2Q9UKV8 859 aaKnown RBP10.83□□□□□ -0.68
ABCF1-201ENST00000326195 ARVCFO00192 962 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 HNRNPRO43390 633 aaKnown RBP10.83□□□□□ -0.68
ABCF1-201ENST00000326195 CHRNA1P02708 482 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 ARL2P36404 184 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 NEK3P51956 506 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 PRMT2P55345 433 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 MARSP56192 900 aaKnown RBP10.83□□□□□ -0.68
ABCF1-201ENST00000326195 SNX17Q15036 470 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 RASIP1Q5U651 963 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 IRF2BP2Q7Z5L9 587 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 ZDHHC14Q8IZN3 488 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 DBF4BQ8NFT6 615 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 ADAM2Q99965 735 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 TMEM206Q9H813 350 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms